Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AP000867.2-201ENST00000532468 320 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 AC104581.2-201ENST00000572227 430 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 MIR4506-201ENST00000584693 77 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 AC060766.3-201ENST00000591442 263 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 VN1R91P-201ENST00000594377 169 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 7SK.7-201ENST00000603504 247 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 Z98751.3-201ENST00000604447 521 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 AC019159.1-201ENST00000605094 187 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 AC087588.2-201ENST00000617667 426 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 MIR3529-201ENST00000637713 78 ntBASIC3.55□□□□□ -1.84
RTF1Q92541 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTF1Q92541 AC009541.1-201ENST00000438279 2662 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RTF1Q92541 AL355596.1-201ENST00000565399 3996 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 RNU6-196P-201ENST00000384315 107 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 Y_RNA.557-201ENST00000384680 107 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 RNA5SP494-201ENST00000410653 129 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 EIF1AXP1-201ENST00000419267 435 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 AC092423.1-201ENST00000430165 186 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.54□□□□□ -1.84
RTF1Q92541 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.54□□□□□ -1.84
RTF1Q92541 RNU6-581P-201ENST00000516214 105 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 RN7SKP282-201ENST00000516824 299 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.54□□□□□ -1.84
RTF1Q92541 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.54□□□□□ -1.84
RTF1Q92541 MIR3605-201ENST00000583214 100 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 MIR5188-201ENST00000583467 113 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 PRR13P7-201ENST00000605538 430 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 MIR1244-1-201ENST00000612829 85 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 AL132822.1-201ENST00000617063 513 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 MIR1244-3-201ENST00000635744 85 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 MIR1244-2-201ENST00000636449 85 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 MIR1244-4-202ENST00000636813 85 ntBASIC3.54□□□□□ -1.84
RTF1Q92541 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTF1Q92541 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTF1Q92541 GABRG2-229ENST00000641017 3628 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 RNU6-858P-201ENST00000362436 107 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 SNORD56.1-201ENST00000362913 68 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 Y_RNA.153-201ENST00000363615 91 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 RNU6-487P-201ENST00000365430 104 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 SNORD14.1-201ENST00000365609 90 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 RNU6-198P-201ENST00000384258 104 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 RNU6-843P-201ENST00000384454 104 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 Y_RNA.526-201ENST00000384572 110 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 Y_RNA.605-201ENST00000410577 105 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 RPL23AP95-201ENST00000426806 265 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 AC112220.1-201ENST00000434628 355 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.53□□□□□ -1.84
RTF1Q92541 AL031659.1-201ENST00000447075 539 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.53□□□□□ -1.84
RTF1Q92541 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.53□□□□□ -1.84
RTF1Q92541 AC090525.1-201ENST00000479116 478 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 AC096725.1-201ENST00000514266 313 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 SNORA9.3-201ENST00000516383 129 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 SNORD59.2-201ENST00000516873 68 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 SNORD19.2-201ENST00000516978 73 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 SNORA31.23-201ENST00000517219 133 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 CKS1BP7-201ENST00000522230 235 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 AC016256.1-201ENST00000547971 354 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.53□□□□□ -1.84
RTF1Q92541 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.53□□□□□ -1.84
RTF1Q92541 AL355297.3-201ENST00000604082 446 ntBASIC3.53□□□□□ -1.84
RTF1Q92541 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTF1Q92541 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.53□□□□□ -1.84
RTF1Q92541 AC108206.1-201ENST00000570186 4159 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTF1Q92541 Y_RNA.149-201ENST00000363558 117 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 SNORD32A-201ENST00000364805 84 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.52□□□□□ -1.85
RTF1Q92541 SNORA69.1-201ENST00000390904 137 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 SNORA12.2-201ENST00000391040 156 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.52□□□□□ -1.85
RTF1Q92541 U8.20-201ENST00000459445 131 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 MTATP8P1-201ENST00000467115 207 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 ACA59.2-201ENST00000517061 156 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 AC008269.2-201ENST00000561915 1105 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 AC006600.1-201ENST00000572529 153 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 AC100812.1-201ENST00000607622 580 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.52□□□□□ -1.85
RTF1Q92541 AC243829.7-201ENST00000633081 225 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RTF1Q92541 AC233981.2-201ENST00000611524 1614 ntBASIC3.52□□□□□ -1.85
RTF1Q92541 MIR449A-201ENST00000362113 91 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 RNU4-9P-201ENST00000364951 139 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 RN7SKP123-201ENST00000410732 291 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 AC023141.4-201ENST00000412031 328 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 BMS1P22-201ENST00000414726 313 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 MTCO3P19-201ENST00000415864 321 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 DPH3P2-201ENST00000422618 250 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 RPS15AP5-201ENST00000436276 388 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 RPS29P6-201ENST00000438196 145 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 AL161651.1-201ENST00000440882 223 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 RNU7-175P-201ENST00000515915 61 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 RNU5F-8P-201ENST00000515941 111 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 SNORA31.1-201ENST00000515993 133 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 SNORA31.5-201ENST00000516190 133 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 AC124312.5-201ENST00000604451 268 ntBASIC3.51□□□□□ -1.85
RTF1Q92541 AL021879.1-201ENST00000611756 288 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms