Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 MIR5696-201ENST00000578474 85 ntBASIC3.16□□□□□ -1.9
RAPGEF4Q8WZA2 AL391813.1-201ENST00000603098 260 ntBASIC3.16□□□□□ -1.9
RAPGEF4Q8WZA2 AC107871.2-201ENST00000612894 502 ntBASIC3.16□□□□□ -1.9
RAPGEF4Q8WZA2 AC024581.2-201ENST00000619986 252 ntBASIC3.16□□□□□ -1.9
RAPGEF4Q8WZA2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.16□□□□□ -1.9
RAPGEF4Q8WZA2 AC069528.2-201ENST00000624849 1991 ntBASIC3.16□□□□□ -1.9
RAPGEF4Q8WZA2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAPGEF4Q8WZA2 AC091564.4-201ENST00000533934 2194 ntBASIC3.15□□□□□ -1.9
RAPGEF4Q8WZA2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
RAPGEF4Q8WZA2 RNU6-858P-201ENST00000362436 107 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.326-201ENST00000365176 113 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-622P-201ENST00000384272 103 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 MIR559-201ENST00000385188 96 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 PTGES3P4-201ENST00000426243 356 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 MTND3P9-201ENST00000429526 346 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-470P-201ENST00000515954 104 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 RNU5B-3P-201ENST00000516601 115 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 AC007536.1-201ENST00000533382 349 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 SNRPGP18-201ENST00000553000 214 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 AC019159.1-201ENST00000605094 187 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 AL356157.2-201ENST00000605122 111 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 AC097372.5-201ENST00000623665 376 ntBASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RAPGEF4Q8WZA2 MTND5P30-201ENST00000452896 1731 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.5-201ENST00000362334 102 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 SNORD56.1-201ENST00000362913 68 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 SNORD50.1-201ENST00000362987 71 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 SNORA63-201ENST00000363450 132 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 SNORD21-201ENST00000383953 95 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.463-201ENST00000384271 102 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-19P-201ENST00000384718 107 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 SNORD88.1-201ENST00000408684 91 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 RNA5SP390-201ENST00000410191 113 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 AC096638.1-201ENST00000444678 216 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 AC079354.2-201ENST00000453523 154 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 RNU5F-8P-201ENST00000515941 111 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 ELOCP31-201ENST00000540463 467 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 MIR4273-201ENST00000582824 84 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 MIR3171-201ENST00000584270 74 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-91P-201ENST00000607774 107 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 FAM35CP-201ENST00000554755 2470 ntBASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RAPGEF4Q8WZA2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 MTND5P6-201ENST00000422338 1798 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-490P-201ENST00000362985 107 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 RNU1-105P-201ENST00000363470 161 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 SNORD32A-201ENST00000364805 84 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 CD24P4-201ENST00000382840 243 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.445-201ENST00000384168 102 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-692P-201ENST00000384496 107 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-1245P-201ENST00000411130 106 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 AC018865.2-201ENST00000423631 129 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 RPL23AP95-201ENST00000426806 265 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 RPS12P2-201ENST00000439728 269 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 AC022447.4-201ENST00000504053 364 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 SMURF2P1-201ENST00000514992 481 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.711-201ENST00000516993 102 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 AP003072.1-201ENST00000531740 145 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 SUB1P3-201ENST00000564581 315 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 AC022432.1-201ENST00000595739 310 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.812-201ENST00000610788 101 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 AC009318.2-201ENST00000610917 651 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.784-201ENST00000613803 101 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.787-201ENST00000616522 101 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.780-201ENST00000617336 101 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.801-201ENST00000619005 101 ntBASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RAPGEF4Q8WZA2 MTND5P9-201ENST00000503854 1755 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 AC103988.1-201ENST00000566382 2177 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 RNU6-799P-201ENST00000363567 107 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 Y_RNA.252-201ENST00000364556 101 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 BTF3L4P2-201ENST00000392798 346 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 MIR1289-2-201ENST00000408360 111 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 AL031659.1-201ENST00000447075 539 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 MIR2053-201ENST00000459295 91 ntBASIC3.12□□□□□ -1.91
RAPGEF4Q8WZA2 FO393415.2-201ENST00000480085 343 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms