Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 SNORA67.6-201ENST00000391093 99 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 RPS29P13-201ENST00000402041 169 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 RNU4-55P-201ENST00000410731 137 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 RN7SKP101-201ENST00000411376 320 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AL030996.1-201ENST00000411430 235 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AC010975.2-201ENST00000427781 588 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 SNAP23P1-201ENST00000433229 246 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AC009474.2-201ENST00000451383 136 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AC090115.3-201ENST00000553218 849 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 ANP32BP3-201ENST00000559213 706 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AC012507.3-201ENST00000603556 477 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AC018889.1-201ENST00000605372 397 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 uc_338.5-201ENST00000611839 155 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 MIR8070-201ENST00000616510 88 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 uc_338.34-201ENST00000617467 174 ntBASIC1.38□□□□□ -2.19
LINC01560Q8TB33 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.38□□□□□ -2.19
LINC01560Q8TB33 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.37□□□□□ -2.19
LINC01560Q8TB33 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AL391987.6-201ENST00000305671 199 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01560Q8TB33 Y_RNA.51-201ENST00000362725 102 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 Y_RNA.255-201ENST00000364581 97 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 SNORA46.1-201ENST00000391069 153 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 SNORA12-201ENST00000391162 147 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 MIR1283-2-201ENST00000408621 87 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 RNU6-174P-201ENST00000410406 106 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC01560Q8TB33 MTCO2P18-201ENST00000457151 658 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AK3P2-201ENST00000507976 429 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 PTP4A1P4-201ENST00000512479 322 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 MTND3P5-201ENST00000512798 333 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 SNORA40.12-201ENST00000516329 111 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 SNORA31.16-201ENST00000516773 139 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 RNU1-92P-201ENST00000517017 135 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AC115990.1-201ENST00000526957 301 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AC004223.2-201ENST00000590309 544 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AC012493.3-201ENST00000604494 112 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 AL034555.1-201ENST00000604816 211 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 RNU6-85P-201ENST00000605989 107 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 U2.17-201ENST00000611454 95 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 SNORD98-201ENST00000636377 67 ntBASIC1.37□□□□□ -2.19
LINC01560Q8TB33 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 RNU6-1164P-201ENST00000364428 107 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 RNU6-1141P-201ENST00000364520 107 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 Y_RNA.409-201ENST00000383990 98 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 SNORD116-2-201ENST00000384274 95 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 SNORD116-6-201ENST00000384711 96 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 RNA5SP219-201ENST00000390940 113 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AL606923.1-201ENST00000406616 190 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC004965.1-201ENST00000413033 213 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 BX510359.4-201ENST00000423750 193 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 CBX3P6-201ENST00000430257 527 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 USP9YP14-201ENST00000430663 563 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 VN1R108P-201ENST00000431580 830 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 RPL23AP3-201ENST00000453844 468 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 RN7SL274P-201ENST00000492268 272 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC145146.1-201ENST00000496370 254 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC091874.1-201ENST00000511402 339 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 MTND4P7-201ENST00000523876 130 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 VN1R107P-201ENST00000601784 209 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC017083.3-201ENST00000609955 700 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01560Q8TB33 AC139792.3-201ENST00000623525 224 ntBASIC1.36□□□□□ -2.19
LINC01560Q8TB33 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.35□□□□□ -2.19
LINC01560Q8TB33 MTND5P26-201ENST00000426018 1752 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 SNORD32B-201ENST00000364460 84 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 SNORD48-201ENST00000364953 64 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 SNORA25.9-201ENST00000365087 128 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 Y_RNA.327-201ENST00000365201 102 ntBASIC1.35□□□□□ -2.19
LINC01560Q8TB33 SNORD14D-201ENST00000384390 87 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms