Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL672296.1-201ENST00000427780 2158 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 AC099654.7-201ENST00000635788 2127 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUP43Q8NFH3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP43Q8NFH3 Y_RNA.441-201ENST00000384123 112 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 Y_RNA.498-201ENST00000384460 102 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 MIR200C-201ENST00000384980 68 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 AL512633.1-201ENST00000399931 655 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 HSPE1P26-201ENST00000405341 275 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP43Q8NFH3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP43Q8NFH3 RNU1-45P-201ENST00000517191 141 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 AC115990.1-201ENST00000526957 301 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.49□□□□□ -1.85
NUP43Q8NFH3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP43Q8NFH3 AL356575.1-201ENST00000603008 283 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 AC068831.7-201ENST00000616954 363 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 AC073308.1-201ENST00000623696 305 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 SNORD98-201ENST00000636377 67 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUP43Q8NFH3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP43Q8NFH3 AC092593.1-201ENST00000515413 1815 ntBASIC3.49□□□□□ -1.85
NUP43Q8NFH3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
NUP43Q8NFH3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP43Q8NFH3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 AF127577.6-201ENST00000623352 2191 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 SNORD46.1-201ENST00000364139 104 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 RNU4-56P-201ENST00000364700 142 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 RNU6-81P-201ENST00000365608 104 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 IFNA11P-201ENST00000446352 526 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 RNA5SP310-201ENST00000459084 116 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 RNU6-155P-201ENST00000516347 100 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 CYP4A27P-201ENST00000567218 190 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 DEFB117-201ENST00000602356 141 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 AL008718.3-201ENST00000610217 321 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 AC012531.5-201ENST00000611375 151 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 AC005520.5-201ENST00000613926 164 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 AC002543.1-201ENST00000299783 1954 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NUP43Q8NFH3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.48□□□□□ -1.85
NUP43Q8NFH3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AL133383.2-201ENST00000622958 2336 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 CUL1P1-201ENST00000509510 2425 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 RNU6-1272P-201ENST00000362776 107 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AL357139.1-201ENST00000407792 426 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 CYCSP48-201ENST00000417124 323 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AL591419.1-201ENST00000427423 339 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 RPS15AP5-201ENST00000436276 388 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AL161651.1-201ENST00000440882 223 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 HMGB3P3-201ENST00000510526 400 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AC008011.1-201ENST00000545989 227 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AC087499.8-201ENST00000578406 226 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 RN7SL703P-201ENST00000578485 302 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 MIR4644-201ENST00000579929 84 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 MIR3136-201ENST00000583498 78 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 HSPE1P7-201ENST00000604681 321 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AP001485.1-201ENST00000604799 199 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 AC244205.2-202ENST00000635781 342 ntBASIC3.47□□□□□ -1.85
NUP43Q8NFH3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUP43Q8NFH3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
NUP43Q8NFH3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NUP43Q8NFH3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NUP43Q8NFH3 CEP170P1-201ENST00000502249 4587 ntBASIC3.46□□□□□ -1.85
NUP43Q8NFH3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.46□□□□□ -1.85
NUP43Q8NFH3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.46□□□□□ -1.86
NUP43Q8NFH3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.46□□□□□ -1.86
NUP43Q8NFH3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.46□□□□□ -1.86
NUP43Q8NFH3 MAPK10-372ENST00000641954 3413 ntBASIC3.46□□□□□ -1.86
NUP43Q8NFH3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.46□□□□□ -1.86
NUP43Q8NFH3 SNORD6-201ENST00000365444 73 ntBASIC3.46□□□□□ -1.86
NUP43Q8NFH3 MIR449B-201ENST00000384995 97 ntBASIC3.46□□□□□ -1.86
NUP43Q8NFH3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NUP43Q8NFH3 U3.26-201ENST00000391236 204 ntBASIC3.46□□□□□ -1.86
NUP43Q8NFH3 EI24P2-201ENST00000397776 1076 ntBASIC3.46□□□□□ -1.86
NUP43Q8NFH3 MIR208B-201ENST00000401172 77 ntBASIC3.46□□□□□ -1.86
NUP43Q8NFH3 MIR1183-201ENST00000408856 89 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms