Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 Y_RNA.573-201ENST00000384763 105 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 RNU6-192P-201ENST00000391253 100 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 RNA5SP118-201ENST00000410385 109 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AL137159.1-201ENST00000452808 512 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 PRELID3BP1-201ENST00000457142 540 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 PPP1R2P5-201ENST00000457256 603 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AC104564.1-201ENST00000493028 407 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 SLC25A15P5-201ENST00000508033 253 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AC026371.1-201ENST00000551867 419 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 GTF3AP2-201ENST00000557014 266 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AC024614.2-201ENST00000577584 372 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AC026271.5-201ENST00000577873 130 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 MIR5089-201ENST00000580047 84 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 MIR3662-201ENST00000637030 95 ntBASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC197Q8NCU1 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 Y_RNA.414-201ENST00000384011 101 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 MIR1262-201ENST00000408276 93 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 RNU6-1148P-201ENST00000410992 104 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 AL139156.1-201ENST00000412785 841 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 ZNF885P-201ENST00000420174 1098 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 AL513185.2-201ENST00000425543 193 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 MTND1P4-201ENST00000435196 415 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 RNU7-187P-201ENST00000458985 68 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 AC007547.1-201ENST00000462177 490 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 MTCO1P29-201ENST00000496868 288 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 ANXA2P1-201ENST00000505539 926 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 RNU6-718P-201ENST00000516166 105 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 AC016256.1-201ENST00000547971 354 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 CYP4A27P-201ENST00000567218 190 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 MIR3923-201ENST00000579521 83 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 AC080078.2-201ENST00000603766 501 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 AL133215.3-201ENST00000609801 448 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 AL138726.1-201ENST00000614873 333 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 SDR42E1P4-201ENST00000620894 481 ntBASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
CCDC197Q8NCU1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 Y_RNA.135-201ENST00000363439 95 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 Y_RNA.157-201ENST00000363638 102 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 MIR1294-201ENST00000408503 142 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 MIR1277-201ENST00000408536 78 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 SNORA11.4-201ENST00000408823 129 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 EIF1AXP1-201ENST00000419267 435 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AC107083.1-201ENST00000439643 279 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AC107032.1-201ENST00000485945 480 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AC114801.2-201ENST00000503825 781 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 RNU6-567P-201ENST00000516746 107 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 RNU6-256P-201ENST00000516747 97 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 SNORA70.24-201ENST00000517233 118 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 IGKV3-31-201ENST00000523109 329 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 MIR4444-1-201ENST00000581696 74 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 MIR4444-2-201ENST00000584390 74 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AC096577.2-201ENST00000611455 153 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AC005520.5-201ENST00000613926 164 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AL359314.1-201ENST00000616913 261 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC197Q8NCU1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.9□□□□□ -2.1
CCDC197Q8NCU1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
CCDC197Q8NCU1 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
CCDC197Q8NCU1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 RNU6-378P-201ENST00000384324 107 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 RNU6-95P-201ENST00000384697 107 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 MIR676-201ENST00000390702 67 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 FCF1P9-201ENST00000412546 282 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 SRIP3-201ENST00000413200 219 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 AL139413.1-201ENST00000421309 217 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 EIF1P1-201ENST00000421436 341 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 AL645568.3-201ENST00000433683 316 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 RPL23AP83-201ENST00000434984 473 ntBASIC1.9□□□□□ -2.11
CCDC197Q8NCU1 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms