Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RN7SL274P-201ENST00000492268 272 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 AC015911.1-201ENST00000495111 156 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 AC018630.3-201ENST00000542637 96 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC63Q8NA47 AC233702.2-202ENST00000562547 291 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 SNORA59B-202ENST00000578183 701 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 AL670379.2-201ENST00000604983 252 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 AC063943.3-201ENST00000615562 356 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 DUXAP9-208ENST00000622815 614 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 CTSLP2-204ENST00000629029 392 ntBASIC2.13□□□□□ -2.07
CCDC63Q8NA47 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC63Q8NA47 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC63Q8NA47 RNU6-227P-201ENST00000362865 103 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 RNU6-525P-201ENST00000363685 104 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 SNORA80A-201ENST00000363922 136 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 Y_RNA.212-201ENST00000364177 102 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 RNU6-95P-201ENST00000384697 107 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 MIR561-201ENST00000385216 97 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 SNORA48.3-201ENST00000391081 134 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC63Q8NA47 RNA5SP270-201ENST00000411361 118 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 RPL30P16-201ENST00000419341 429 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 MTND3P9-201ENST00000429526 346 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC63Q8NA47 AC009238.1-201ENST00000442165 424 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 AC009237.6-201ENST00000446969 424 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.12□□□□□ -2.07
CCDC63Q8NA47 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC63Q8NA47 RNA5SP200-201ENST00000516360 103 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 RNA5SP137-201ENST00000516833 135 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC63Q8NA47 MIR3136-201ENST00000583498 78 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 AC023043.2-201ENST00000589678 1026 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 AC022202.1-201ENST00000613515 211 ntBASIC2.12□□□□□ -2.07
CCDC63Q8NA47 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC092268.1-201ENST00000342691 405 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 RNU6-142P-201ENST00000384019 107 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 Y_RNA.504-201ENST00000384481 104 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 SUMO2P12-201ENST00000405924 140 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 Y_RNA.597-201ENST00000410463 100 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AL645568.3-201ENST00000433683 316 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 MTCO1P29-201ENST00000496868 288 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC016632.1-201ENST00000503994 196 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC096745.1-201ENST00000509945 370 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 PTP4A1P4-201ENST00000512479 322 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 RNU6-864P-201ENST00000516256 108 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC034114.1-201ENST00000520293 285 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC107953.1-201ENST00000522216 297 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 EIF4BP1-201ENST00000554881 351 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AC005000.2-201ENST00000605468 310 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AL133215.3-201ENST00000609801 448 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 U6atac.1-201ENST00000616025 117 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 AL132822.1-201ENST00000617063 513 ntBASIC2.11□□□□□ -2.07
CCDC63Q8NA47 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.11□□□□□ -2.07
CCDC63Q8NA47 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CCDC63Q8NA47 Y_RNA.86-201ENST00000363020 111 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 Y_RNA.248-201ENST00000364501 109 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 SNORA12-201ENST00000391162 147 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 RNA5SP201-201ENST00000410316 124 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 RNU2-32P-201ENST00000411193 191 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 EDDM3CP-201ENST00000415977 425 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AC009963.1-201ENST00000417265 157 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 IFNA20P-201ENST00000436840 528 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 U8.21-201ENST00000459536 136 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AC145146.1-201ENST00000496370 254 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC63Q8NA47 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 RNU6-358P-201ENST00000516564 75 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 RNU6-1088P-201ENST00000516850 104 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AF235103.2-201ENST00000525753 346 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 NDUFA5P6-201ENST00000542110 379 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AC018638.8-201ENST00000588755 281 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AC060780.3-201ENST00000589464 80 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC63Q8NA47 Z98751.3-201ENST00000604447 521 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.1□□□□□ -2.07
CCDC63Q8NA47 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CCDC63Q8NA47 AC009541.1-201ENST00000438279 2662 ntBASIC2.1□□□□□ -2.07
CCDC63Q8NA47 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
CCDC63Q8NA47 Y_RNA.151-201ENST00000363566 112 ntBASIC2.09□□□□□ -2.07
CCDC63Q8NA47 SNORD32B-201ENST00000364460 84 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms