Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
KRT78Q8N1N4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.04□□□□□ -1.92
KRT78Q8N1N4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
KRT78Q8N1N4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.03□□□□□ -1.92
KRT78Q8N1N4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KRT78Q8N1N4 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KRT78Q8N1N4 Y_RNA.389-201ENST00000383924 113 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 MIR23B-201ENST00000384832 97 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 RN7SKP123-201ENST00000410732 291 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 AC008267.5-201ENST00000424928 265 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 RN7SL863P-201ENST00000462370 296 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 RN7SL807P-201ENST00000470923 297 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 FO393415.2-201ENST00000480085 343 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.03□□□□□ -1.92
KRT78Q8N1N4 AC022447.4-201ENST00000504053 364 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.03□□□□□ -1.92
KRT78Q8N1N4 MIR5680-201ENST00000577577 84 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 AC005899.2-201ENST00000584353 90 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 AL356280.1-201ENST00000603614 379 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 AC062037.2-201ENST00000610137 73 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 AC078938.1-201ENST00000620993 318 ntBASIC3.03□□□□□ -1.92
KRT78Q8N1N4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KRT78Q8N1N4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
KRT78Q8N1N4 MIR148B-201ENST00000362252 99 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.80-201ENST00000362996 102 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 SNORD56.5-201ENST00000364281 72 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 RNU6-450P-201ENST00000364654 107 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 RNU6-596P-201ENST00000365395 98 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.485-201ENST00000384395 102 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 SNORD15B-201ENST00000384714 146 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 MIR34B-201ENST00000385076 84 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 RNU6-1109P-201ENST00000391187 107 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 RNA5SP120-201ENST00000410900 112 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.02□□□□□ -1.93
KRT78Q8N1N4 USMG5P1-201ENST00000425964 177 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.02□□□□□ -1.93
KRT78Q8N1N4 snoU13.22-201ENST00000459428 104 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AC090525.1-201ENST00000479116 478 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AC074250.1-201ENST00000511117 192 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 RNU6-470P-201ENST00000515954 104 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 RNU6-1143P-201ENST00000516125 104 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.668-201ENST00000516233 93 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AC078899.3-201ENST00000599065 212 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AL034555.1-201ENST00000604816 211 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AC100812.1-201ENST00000607622 580 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AC107871.2-201ENST00000612894 502 ntBASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRT78Q8N1N4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KRT78Q8N1N4 AC005592.1-201ENST00000566527 1640 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.556-201ENST00000384677 113 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 SNORA75.6-201ENST00000391318 127 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 CBX3P9-201ENST00000402326 552 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 FO393413.1-201ENST00000402892 195 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 MIR548I3-201ENST00000408378 149 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 MIR548I1-201ENST00000408810 149 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 Z75741.1-201ENST00000446793 314 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AL513124.1-201ENST00000450410 614 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AC080013.2-201ENST00000460866 323 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AC068781.1-201ENST00000488231 618 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.721-201ENST00000517207 102 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AC023442.1-201ENST00000531247 422 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AC016256.1-201ENST00000547971 354 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 MIR5739-201ENST00000619803 80 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AC018692.3-201ENST00000623929 123 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 MIR622-201ENST00000638396 96 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AC091812.1-201ENST00000432235 1948 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 AC008264.2-201ENST00000610193 3731 ntBASIC3.01□□□□□ -1.93
KRT78Q8N1N4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KRT78Q8N1N4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
KRT78Q8N1N4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
KRT78Q8N1N4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
KRT78Q8N1N4 snoU2_19.1-201ENST00000362361 80 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 RNU6-1286P-201ENST00000383871 107 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.396-201ENST00000383949 103 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 RNU6-209P-201ENST00000384118 107 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 RNU6-842P-201ENST00000384269 107 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 Y_RNA.489-201ENST00000384410 101 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 RNVU1-14-201ENST00000384770 164 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 RNU6-174P-201ENST00000410406 106 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 RNA5SP494-201ENST00000410653 129 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 RNU2-63P-201ENST00000410792 194 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 AIMP1P2-201ENST00000425294 312 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 AC092427.1-202ENST00000430569 476 ntBASIC3□□□□□ -1.93
KRT78Q8N1N4 AL445687.1-201ENST00000439946 251 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms