Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL159153.1-201ENST00000619688 317 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
VPS52Q8N1B4 AC002543.1-201ENST00000299783 1954 ntBASIC2.8□□□□□ -1.96
VPS52Q8N1B4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS52Q8N1B4 AC073544.1-201ENST00000600110 1595 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 RNU6-1141P-201ENST00000364520 107 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.404-201ENST00000383978 102 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 RNU1-138P-201ENST00000384093 164 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.460-201ENST00000384255 102 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 RNU6-43P-201ENST00000384302 107 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 RNU6-784P-201ENST00000384330 106 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 MIR521-1-201ENST00000384902 87 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 RNU2-23P-201ENST00000410545 195 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS52Q8N1B4 EIF4EP2-201ENST00000422816 654 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS52Q8N1B4 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS52Q8N1B4 UBE2V1P7-201ENST00000446395 340 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS52Q8N1B4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS52Q8N1B4 RNU1-104P-201ENST00000517280 175 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.79□□□□□ -1.96
VPS52Q8N1B4 AC109446.1-201ENST00000566172 220 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 AC126177.8-201ENST00000618339 1015 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 CTSLP2-204ENST00000629029 392 ntBASIC2.79□□□□□ -1.96
VPS52Q8N1B4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
VPS52Q8N1B4 SNORD50.1-201ENST00000362987 71 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 RNU6-1285P-201ENST00000363480 105 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 RNU4-76P-201ENST00000364509 141 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 SNORA68.1-201ENST00000364537 132 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.813-201ENST00000364639 102 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.431-201ENST00000384086 102 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.473-201ENST00000384333 102 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 RNU6-310P-201ENST00000384655 107 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 MIR544A-201ENST00000384855 91 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 BTF3L4P2-201ENST00000392798 346 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 AL133475.1-201ENST00000404414 305 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 RNU6-1140P-201ENST00000410517 106 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 RN7SKP61-201ENST00000410642 295 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS52Q8N1B4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS52Q8N1B4 USMG5P1-201ENST00000425964 177 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS52Q8N1B4 Y_RNA.653-201ENST00000459091 95 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 snoU13.14-201ENST00000459372 104 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 RPL7P42-201ENST00000481005 679 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 ANXA2P1-201ENST00000505539 926 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS52Q8N1B4 SMURF2P1-201ENST00000514992 481 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS52Q8N1B4 MIR5696-201ENST00000578474 85 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 MIR4635-201ENST00000583759 79 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS52Q8N1B4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 PISRT1.1-201ENST00000616930 107 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 AL160413.1-201ENST00000622780 310 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS52Q8N1B4 AL359854.1-201ENST00000614203 1594 ntBASIC2.78□□□□□ -1.96
VPS52Q8N1B4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS52Q8N1B4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS52Q8N1B4 Y_RNA.315-201ENST00000365117 102 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 Y_RNA.646-201ENST00000410980 101 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 MICF-203ENST00000432679 129 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 RPL39P29-201ENST00000447779 157 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 AC079354.2-201ENST00000453523 154 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 SRIP1-201ENST00000489235 288 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 AC097473.1-201ENST00000508142 408 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS52Q8N1B4 RNA5SP320-201ENST00000516263 124 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 RNU6-1213P-201ENST00000517075 94 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 AC016256.1-201ENST00000547971 354 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 AC009318.2-201ENST00000610917 651 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 AC007792.1-201ENST00000623023 402 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 AC090574.1-201ENST00000623186 233 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 AC010297.1-201ENST00000623948 149 ntBASIC2.77□□□□□ -1.97
VPS52Q8N1B4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
VPS52Q8N1B4 MTND5P30-201ENST00000452896 1731 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
VPS52Q8N1B4 AP000560.1-201ENST00000624150 1937 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 AC010329.5-201ENST00000623497 2174 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 SNORD114-19-201ENST00000363072 75 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
VPS52Q8N1B4 MIR27B-201ENST00000385129 97 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 SNORA75.6-201ENST00000391318 127 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS52Q8N1B4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS52Q8N1B4 Z82205.1-201ENST00000428456 297 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS52Q8N1B4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS52Q8N1B4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS52Q8N1B4 MTCO3P10-201ENST00000455912 772 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 HMGN1P13-201ENST00000505795 138 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 AC005741.1-201ENST00000511094 432 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 AC091874.1-201ENST00000511402 339 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 AL049779.4-201ENST00000604500 156 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 SNORA43.4-201ENST00000629559 138 ntBASIC2.76□□□□□ -1.97
VPS52Q8N1B4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS52Q8N1B4 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms