Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX5Q8N196 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX5Q8N196 AC006111.3-201ENST00000622137 383 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIX5Q8N196 AC026241.1-201ENST00000517873 2142 ntBASIC4.28□□□□□ -1.72
SIX5Q8N196 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SIX5Q8N196 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX5Q8N196 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SIX5Q8N196 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX5Q8N196 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX5Q8N196 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX5Q8N196 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX5Q8N196 Y_RNA.23-201ENST00000362496 106 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 RNU1-83P-201ENST00000363426 164 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 RNU6-454P-201ENST00000364292 107 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 RNU6-1130P-201ENST00000365434 107 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 RNU1-57P-201ENST00000384491 166 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 MIR186-201ENST00000384988 86 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 RNU6-763P-201ENST00000390865 106 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 RNU6-710P-201ENST00000410424 105 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 SNORA57.3-201ENST00000411095 141 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 TOMM22P2-201ENST00000430735 237 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 HMGN2P7-201ENST00000456186 273 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 AC112771.1-201ENST00000463581 102 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 SNRPGP3-201ENST00000469405 227 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 RPS29P19-201ENST00000479709 171 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 RPL23AP70-201ENST00000483361 460 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX5Q8N196 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.27□□□□□ -1.73
SIX5Q8N196 HSPE1P18-201ENST00000517602 280 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.27□□□□□ -1.73
SIX5Q8N196 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
SIX5Q8N196 AL353746.1-201ENST00000566293 6881 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 Z82217.1-201ENST00000625157 8149 ntBASIC4.27□□□□□ -1.73
SIX5Q8N196 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX5Q8N196 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.27□□□□□ -1.73
SIX5Q8N196 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SIX5Q8N196 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SIX5Q8N196 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
SIX5Q8N196 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SIX5Q8N196 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.26□□□□□ -1.73
SIX5Q8N196 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SIX5Q8N196 RNU6-81P-201ENST00000365608 104 ntBASIC4.26□□□□□ -1.73
SIX5Q8N196 AL031003.1-201ENST00000404229 172 ntBASIC4.26□□□□□ -1.73
SIX5Q8N196 SNORA71B-202ENST00000439232 272 ntBASIC4.26□□□□□ -1.73
SIX5Q8N196 Y_RNA.637-201ENST00000459424 114 ntBASIC4.26□□□□□ -1.73
SIX5Q8N196 AC005840.1-201ENST00000498412 377 ntBASIC4.26□□□□□ -1.73
SIX5Q8N196 AC026403.1-201ENST00000518938 295 ntBASIC4.26□□□□□ -1.73
SIX5Q8N196 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.26□□□□□ -1.73
SIX5Q8N196 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.26□□□□□ -1.73
SIX5Q8N196 AL391813.1-201ENST00000603098 260 ntBASIC4.26□□□□□ -1.73
SIX5Q8N196 AC005086.4-201ENST00000623065 213 ntBASIC4.26□□□□□ -1.73
SIX5Q8N196 AC007546.2-201ENST00000623996 360 ntBASIC4.26□□□□□ -1.73
SIX5Q8N196 AC091895.1-201ENST00000624494 256 ntBASIC4.26□□□□□ -1.73
SIX5Q8N196 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SIX5Q8N196 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX5Q8N196 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX5Q8N196 AC006504.1-201ENST00000562493 3666 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX5Q8N196 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX5Q8N196 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SIX5Q8N196 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX5Q8N196 Y_RNA.75-201ENST00000362927 97 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SIX5Q8N196 Y_RNA.412-201ENST00000384001 104 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 Y_RNA.488-201ENST00000384403 102 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 RNU6-1117P-201ENST00000384525 104 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 MIR34B-201ENST00000385076 84 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 AC004866.1-201ENST00000411748 78 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 Z75741.1-201ENST00000446793 314 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 Y_RNA.797-201ENST00000515977 94 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 RNU2-44P-201ENST00000516795 194 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 AC100767.1-201ENST00000528178 123 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.25□□□□□ -1.73
SIX5Q8N196 AL670379.2-201ENST00000604983 252 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 AL078604.3-201ENST00000615580 211 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 AC069528.2-201ENST00000624849 1991 ntBASIC4.25□□□□□ -1.73
SIX5Q8N196 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.24□□□□□ -1.73
SIX5Q8N196 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX5Q8N196 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SIX5Q8N196 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX5Q8N196 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SIX5Q8N196 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SIX5Q8N196 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SIX5Q8N196 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX5Q8N196 SNORD74.4-201ENST00000364129 80 ntBASIC4.24□□□□□ -1.73
SIX5Q8N196 Y_RNA.287-201ENST00000364853 94 ntBASIC4.24□□□□□ -1.73
SIX5Q8N196 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.24□□□□□ -1.73
SIX5Q8N196 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SIX5Q8N196 RN7SKP156-201ENST00000410308 342 ntBASIC4.24□□□□□ -1.73
SIX5Q8N196 SEPT7P4-201ENST00000437076 306 ntBASIC4.24□□□□□ -1.73
SIX5Q8N196 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX5Q8N196 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.24□□□□□ -1.73
SIX5Q8N196 PPIAP15-201ENST00000479662 484 ntBASIC4.24□□□□□ -1.73
SIX5Q8N196 RPL36AP48-201ENST00000485521 314 ntBASIC4.24□□□□□ -1.73
SIX5Q8N196 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.24□□□□□ -1.73
SIX5Q8N196 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX5Q8N196 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.24□□□□□ -1.73
SIX5Q8N196 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.24□□□□□ -1.73
SIX5Q8N196 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms