Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNU6-49P-201ENST00000384256 107 ntBASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 SNORD116-13-201ENST00000384408 92 ntBASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 SNORA70C-201ENST00000384538 135 ntBASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 RNU6-1275P-201ENST00000391087 107 ntBASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 AL049861.1-201ENST00000603130 150 ntBASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 AL022345.2-201ENST00000606307 135 ntBASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 AC007546.2-201ENST00000623996 360 ntBASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 AC004944.1-201ENST00000517807 3059 ntBASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 AC007256.1-201ENST00000392253 2765 ntBASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SCUBE3Q8IX30 SCN1A-220ENST00000641603 12506 ntBASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 AC068254.2-201ENST00000623938 3577 ntBASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 AC092435.4-201ENST00000623012 4159 ntBASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 RNU1-20P-201ENST00000363314 162 ntBASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 RNA5SP28-201ENST00000363841 119 ntBASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 RNU1-44P-201ENST00000384453 163 ntBASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 MIR1185-2-201ENST00000408687 86 ntBASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 AL161651.1-201ENST00000440882 223 ntBASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 ZYXP1-201ENST00000617638 118 ntBASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SCUBE3Q8IX30 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 RNU6-600P-201ENST00000362524 99 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 Y_RNA.40-201ENST00000362645 93 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 Y_RNA.85-201ENST00000363014 111 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 RNU6-1305P-201ENST00000364353 104 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 SNORA7.2-201ENST00000364446 145 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 SNORA51.5-201ENST00000384126 131 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 MIR1302-5-201ENST00000408164 150 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 RNU2-70P-201ENST00000410718 179 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 AC011998.1-201ENST00000433403 117 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 AL121890.1-201ENST00000435457 205 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 snoU13.14-201ENST00000459372 104 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 RPL35AP15-201ENST00000468042 339 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 AC107626.1-201ENST00000471084 183 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 RN7SL810P-201ENST00000493031 276 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 AC145146.1-201ENST00000496370 254 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 AC015795.1-201ENST00000513669 327 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 SNORA40.13-201ENST00000516379 120 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 AC007012.1-201ENST00000567192 175 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 uc_338.13-201ENST00000618243 179 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 MAPK10-320ENST00000641462 6696 ntBASIC4.61□□□□□ -1.67
SCUBE3Q8IX30 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 RNA5SP125-201ENST00000364843 120 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 SNORA11F-201ENST00000408237 128 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 MIR1263-201ENST00000408324 86 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 SNORA74C-2-201ENST00000411179 201 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 RPS29P17-201ENST00000430795 166 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 MTATP6P21-201ENST00000440681 189 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 PHBP16-201ENST00000446318 950 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 RN7SL98P-201ENST00000462271 300 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 AC105137.1-201ENST00000484355 562 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 RNU6-928P-201ENST00000516876 104 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 PRELID2P1-201ENST00000552837 301 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 AC024220.1-201ENST00000603675 484 ntBASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SCUBE3Q8IX30 AL133243.3-201ENST00000617415 3004 ntBASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SCUBE3Q8IX30 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms