Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC017083.1-201ENST00000428093 483 ntBASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 RPL23AP3-201ENST00000453844 468 ntBASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 RPL32P34-201ENST00000486380 400 ntBASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 SNORD98-201ENST00000636377 67 ntBASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 AC007496.3-201ENST00000624987 3443 ntBASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 AL133383.2-201ENST00000622958 2336 ntBASIC3.41□□□□□ -1.86
TRIM48Q8IWZ4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM48Q8IWZ4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM48Q8IWZ4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC3.4□□□□□ -1.86
TRIM48Q8IWZ4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
TRIM48Q8IWZ4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.76-201ENST00000362931 109 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.150-201ENST00000363562 102 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-137P-201ENST00000363680 108 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.200-201ENST00000364018 102 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 RNY1-201ENST00000364228 113 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-487P-201ENST00000365430 104 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.569-201ENST00000384749 103 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 MIR490-201ENST00000384865 128 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 SNORA26.3-201ENST00000391119 136 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 RNA5SP252-201ENST00000391131 119 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 PTMAP5-201ENST00000393073 333 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 AL136097.1-201ENST00000456945 913 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 AC117440.1-201ENST00000474107 571 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 AIG1P1-201ENST00000503376 148 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 SNORA25.14-201ENST00000516481 132 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 MIR3186-201ENST00000577404 85 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 MIR4738-201ENST00000579134 87 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 MIR4425-201ENST00000580572 84 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 MZT1P2-201ENST00000604387 248 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 AL137843.1-201ENST00000605078 385 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 AC010999.1-201ENST00000611856 324 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 MIR7975-201ENST00000619350 68 ntBASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM48Q8IWZ4 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.29-201ENST00000362570 113 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-1175P-201ENST00000365200 107 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.785-201ENST00000384290 109 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 SNORA53-201ENST00000391141 249 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 MIR1298-201ENST00000408783 112 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 SETP5-201ENST00000437270 562 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 RBMY2UP-201ENST00000453474 324 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 U3.44-201ENST00000458938 192 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 RN7SL594P-201ENST00000470590 287 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 RNU5F-2P-201ENST00000516066 82 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 RNU2-31P-201ENST00000516954 155 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 NDUFB9P3-201ENST00000521269 501 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AC105137.2-201ENST00000569073 466 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AC055872.1-201ENST00000570978 278 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 MIR4423-201ENST00000580922 80 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AC004792.1-201ENST00000614523 137 ntBASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
TRIM48Q8IWZ4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 AC002543.1-201ENST00000299783 1954 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 PWAR6-201ENST00000552334 4618 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 AF127577.6-201ENST00000623352 2191 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 AC073073.2-201ENST00000609827 2578 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.40-201ENST00000362645 93 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.44-201ENST00000362676 108 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 RNA5SP387-201ENST00000364226 106 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 RNA5SP42-201ENST00000364278 115 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-740P-201ENST00000364734 105 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.570-201ENST00000384750 101 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 MIR208B-201ENST00000401172 77 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 Y_RNA.595-201ENST00000410403 105 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 RNU6-651P-201ENST00000411040 105 ntBASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.38□□□□□ -1.87
TRIM48Q8IWZ4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms