Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AC099799.1-201ENST00000439809 192 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 Z98949.2-201ENST00000440996 144 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 AC243964.1-201ENST00000441814 261 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 AC009296.1-201ENST00000443146 155 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX6Q8HWS3 RPS27P26-201ENST00000494583 239 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 AC015911.1-201ENST00000495111 156 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.89□□□□□ -1.95
RFX6Q8HWS3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX6Q8HWS3 MIR3605-201ENST00000583214 100 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 AL158827.2-201ENST00000602494 330 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 AL137843.1-201ENST00000605078 385 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 AC009318.2-201ENST00000610917 651 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.89□□□□□ -1.95
RFX6Q8HWS3 AL691447.3-201ENST00000635020 330 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.89□□□□□ -1.95
RFX6Q8HWS3 HAUS6P2-201ENST00000433254 2404 ntBASIC2.89□□□□□ -1.95
RFX6Q8HWS3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFX6Q8HWS3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFX6Q8HWS3 AC073346.2-201ENST00000624724 2058 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 MIR26A1-201ENST00000362205 77 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 SNORD50.1-201ENST00000362987 71 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 RNU6-379P-201ENST00000363813 104 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 Y_RNA.476-201ENST00000384347 108 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 RNU6-843P-201ENST00000384454 104 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 RNU6-19P-201ENST00000384718 107 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 RNU6-1109P-201ENST00000391187 107 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 RN7SKP123-201ENST00000410732 291 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.88□□□□□ -1.95
RFX6Q8HWS3 PTGES3P4-201ENST00000426243 356 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX6Q8HWS3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX6Q8HWS3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX6Q8HWS3 AC097462.2-201ENST00000504623 481 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 SNORA31.23-201ENST00000517219 133 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 MYL12BP1-201ENST00000569826 507 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.88□□□□□ -1.95
RFX6Q8HWS3 MIR5696-201ENST00000578474 85 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 MIR4325-201ENST00000583049 90 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RFX6Q8HWS3 AC008669.1-201ENST00000565823 2178 ntBASIC2.88□□□□□ -1.95
RFX6Q8HWS3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX6Q8HWS3 AC009541.1-201ENST00000438279 2662 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX6Q8HWS3 AC005592.1-201ENST00000566527 1640 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 RNU1-105P-201ENST00000363470 161 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 RNU1-140P-201ENST00000365040 165 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 Y_RNA.577-201ENST00000384794 101 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 RNU6-847P-201ENST00000411115 108 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 AC096649.2-201ENST00000416186 393 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX6Q8HWS3 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX6Q8HWS3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.87□□□□□ -1.95
RFX6Q8HWS3 AC007969.2-201ENST00000441891 191 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 AC107626.1-201ENST00000471084 183 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 SNORA74D-201ENST00000516404 141 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 RNU6-635P-201ENST00000516651 102 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 RNU4-77P-201ENST00000516692 156 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 GNAI2P1-201ENST00000541815 315 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX6Q8HWS3 AC025281.1-201ENST00000567026 265 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 AC091152.3-201ENST00000604227 325 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 RPL23AP88-201ENST00000605759 454 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 SNORD58B-201ENST00000607313 66 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.87□□□□□ -1.95
RFX6Q8HWS3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RFX6Q8HWS3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.87□□□□□ -1.95
RFX6Q8HWS3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AC091812.1-201ENST00000432235 1948 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
RFX6Q8HWS3 RNU6-595P-201ENST00000363944 107 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 RNU6-99P-201ENST00000364721 107 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 RNU6-487P-201ENST00000365430 104 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 RNU1-109P-201ENST00000383960 147 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 SNORA18.3-201ENST00000384122 132 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 RNU6-748P-201ENST00000384648 107 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 MIR627-201ENST00000384979 97 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RFX6Q8HWS3 RNU6-750P-201ENST00000390946 107 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 RNA5SP344-201ENST00000411081 104 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AC009414.1-201ENST00000427200 443 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AL139132.1-201ENST00000431587 344 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AC079354.2-201ENST00000453523 154 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AL441985.1-201ENST00000457727 251 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AC103975.1-201ENST00000482506 483 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 MRPS35P2-201ENST00000508242 191 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 RNU6-475P-201ENST00000516073 104 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.86□□□□□ -1.95
RFX6Q8HWS3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AL356157.2-201ENST00000605122 111 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 UCA1.1-201ENST00000620952 75 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.86□□□□□ -1.95
RFX6Q8HWS3 AC010889.1-201ENST00000566193 2666 ntBASIC2.86□□□□□ -1.95
RFX6Q8HWS3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.86□□□□□ -1.95
RFX6Q8HWS3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms