Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-713P-201ENST00000384761 107 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 MIR147B-201ENST00000390185 80 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 RNU4-47P-201ENST00000410876 114 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 LINC01399-202ENST00000458450 244 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 RNU6-711P-201ENST00000517255 106 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 AC021231.3-201ENST00000558497 370 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 AC105137.2-201ENST00000569073 466 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 AC090617.3-201ENST00000573670 475 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.05□□□□□ -1.76
USP48Q86UV5 RPL12P50-201ENST00000603116 116 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
USP48Q86UV5 Z75746.1-201ENST00000440243 2080 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.05□□□□□ -1.76
USP48Q86UV5 PWAR6-201ENST00000552334 4618 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 AC007496.3-201ENST00000624987 3443 ntBASIC4.05□□□□□ -1.76
USP48Q86UV5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP48Q86UV5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
USP48Q86UV5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
USP48Q86UV5 Y_RNA.27-201ENST00000362540 103 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 RNU1-76P-201ENST00000362903 159 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 Y_RNA.552-201ENST00000384665 112 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 RPL21P75-201ENST00000396599 483 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 RPL21P28-201ENST00000401418 483 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AL590556.1-201ENST00000423231 483 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.04□□□□□ -1.76
USP48Q86UV5 AC006539.3-201ENST00000454258 129 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 RPL21P39-201ENST00000463605 483 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AC087190.1-201ENST00000484462 480 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AC107032.1-201ENST00000485945 480 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AC132942.1-201ENST00000486753 483 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AC093591.1-201ENST00000491435 481 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 RPL21P16-201ENST00000495531 483 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.04□□□□□ -1.76
USP48Q86UV5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.04□□□□□ -1.76
USP48Q86UV5 SNORA70.19-201ENST00000516717 90 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 SNORD59.2-201ENST00000516873 68 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AC115990.1-201ENST00000526957 301 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 HSPE1P20-201ENST00000538133 289 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AL442163.3-201ENST00000554110 156 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.04□□□□□ -1.76
USP48Q86UV5 AC096772.1-201ENST00000609146 564 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AL359198.2-201ENST00000611836 194 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AC141273.2-201ENST00000618989 130 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 AL513302.2-201ENST00000562313 1842 ntBASIC4.04□□□□□ -1.76
USP48Q86UV5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.04□□□□□ -1.76
USP48Q86UV5 AL035425.3-201ENST00000564206 4996 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
USP48Q86UV5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
USP48Q86UV5 RNU1-75P-201ENST00000347264 129 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 MIR449A-201ENST00000362113 91 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 RNU6-1285P-201ENST00000363480 105 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 Y_RNA.477-201ENST00000384352 108 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 RNU6-1093P-201ENST00000391194 107 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 AL365496.1-201ENST00000426885 215 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 AC098869.1-201ENST00000481627 292 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.03□□□□□ -1.76
USP48Q86UV5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.03□□□□□ -1.76
USP48Q86UV5 RNU6-1023P-201ENST00000516137 106 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 AC034114.1-201ENST00000520293 285 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 AL391813.1-201ENST00000603098 260 ntBASIC4.03□□□□□ -1.76
USP48Q86UV5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
USP48Q86UV5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP48Q86UV5 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP48Q86UV5 OR56A5-201ENST00000340110 738 ntBASIC4.02□□□□□ -1.77
USP48Q86UV5 RNU1-105P-201ENST00000363470 161 ntBASIC4.02□□□□□ -1.77
USP48Q86UV5 RNU6-611P-201ENST00000384276 104 ntBASIC4.02□□□□□ -1.77
USP48Q86UV5 Y_RNA.471-201ENST00000384312 102 ntBASIC4.02□□□□□ -1.77
USP48Q86UV5 AL603908.1-201ENST00000406098 201 ntBASIC4.02□□□□□ -1.77
USP48Q86UV5 AC139712.2-201ENST00000424302 339 ntBASIC4.02□□□□□ -1.77
USP48Q86UV5 MTND4LP30-201ENST00000454092 297 ntBASIC4.02□□□□□ -1.77
USP48Q86UV5 GZMAP1-201ENST00000503054 631 ntBASIC4.02□□□□□ -1.77
USP48Q86UV5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
USP48Q86UV5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.02□□□□□ -1.77
USP48Q86UV5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.02□□□□□ -1.77
USP48Q86UV5 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.02□□□□□ -1.77
USP48Q86UV5 AC012433.1-201ENST00000588916 398 ntBASIC4.02□□□□□ -1.77
USP48Q86UV5 RPS15AP11-201ENST00000594193 385 ntBASIC4.02□□□□□ -1.77
USP48Q86UV5 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.02□□□□□ -1.77
USP48Q86UV5 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.02□□□□□ -1.77
USP48Q86UV5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.02□□□□□ -1.77
USP48Q86UV5 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.02□□□□□ -1.77
USP48Q86UV5 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.02□□□□□ -1.77
USP48Q86UV5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USP48Q86UV5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USP48Q86UV5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
USP48Q86UV5 RNA5SP197-201ENST00000363357 119 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 SNORA14A-201ENST00000364773 135 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USP48Q86UV5 MIR767-201ENST00000390228 109 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 SNORA26.3-201ENST00000391119 136 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 EI24P2-201ENST00000397776 1076 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 RNU6-1140P-201ENST00000410517 106 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 AC138623.1-201ENST00000418060 216 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 RPL21P38-201ENST00000418090 167 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 RPL23AP22-201ENST00000437556 453 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 RPEP5-201ENST00000441137 268 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.01□□□□□ -1.77
USP48Q86UV5 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.01□□□□□ -1.77
USP48Q86UV5 SUMO1P2-201ENST00000452524 304 ntBASIC4.01□□□□□ -1.77
USP48Q86UV5 AC025465.3-201ENST00000510570 311 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms