Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SNORA31.16-201ENST00000516773 139 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 MIR4458-201ENST00000578872 75 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 AC091167.4-201ENST00000605079 184 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 AL591926.4-201ENST00000616895 298 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 AL136164.4-201ENST00000625013 2135 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ATG4DQ86TL0 AL133383.2-201ENST00000622958 2336 ntBASIC3.58□□□□□ -1.84
ATG4DQ86TL0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4DQ86TL0 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
ATG4DQ86TL0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4DQ86TL0 Y_RNA.229-201ENST00000364347 113 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 RNU6-1082P-201ENST00000364574 107 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 Y_RNA.393-201ENST00000383936 102 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 Y_RNA.415-201ENST00000384012 112 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 AL031003.1-201ENST00000404229 172 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 AL512604.1-201ENST00000404812 257 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 MIR1290-201ENST00000408735 78 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 MIR1183-201ENST00000408856 89 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 Y_RNA.630-201ENST00000411370 108 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 TOMM22P1-201ENST00000418578 312 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 AL691449.1-201ENST00000426570 421 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 AC078809.1-201ENST00000427601 140 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 HMGB3P8-201ENST00000449709 577 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.57□□□□□ -1.84
ATG4DQ86TL0 AC146944.2-203ENST00000502493 354 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.57□□□□□ -1.84
ATG4DQ86TL0 AC139495.1-202ENST00000513164 354 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.57□□□□□ -1.84
ATG4DQ86TL0 SNORA31.23-201ENST00000517219 133 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 RNA5SP179-201ENST00000517284 121 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 AL391903.3-201ENST00000612158 163 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4DQ86TL0 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.57□□□□□ -1.84
ATG4DQ86TL0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ATG4DQ86TL0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.57□□□□□ -1.84
ATG4DQ86TL0 AC008555.8-201ENST00000623602 2168 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AC092268.1-201ENST00000342691 405 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 U1.1-201ENST00000384101 164 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 RPL21P17-201ENST00000397467 475 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AL355497.1-201ENST00000406262 551 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 RNY4P30-201ENST00000410216 95 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 YPEL5P1-201ENST00000419731 367 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AIMP1P2-201ENST00000425294 312 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AL590383.1-201ENST00000428602 75 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AC125238.1-201ENST00000448842 249 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AC007215.1-201ENST00000464893 276 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 RN7SL542P-201ENST00000467147 294 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 CR383656.8-201ENST00000549046 145 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AC006130.2-201ENST00000586202 326 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 AC012640.5-201ENST00000623897 319 ntBASIC3.56□□□□□ -1.84
ATG4DQ86TL0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.56□□□□□ -1.84
ATG4DQ86TL0 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 MIR450A1-201ENST00000362262 91 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 Y_RNA.35-201ENST00000362601 101 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 RNU6-1205P-201ENST00000363625 106 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 Y_RNA.495-201ENST00000384435 112 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 MIR526A2-201ENST00000390198 65 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 AC244098.2-201ENST00000422068 99 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 AC019205.3-201ENST00000424573 156 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 AL500522.2-201ENST00000448562 343 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 SNORA84-201ENST00000459229 133 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 AC023632.4-201ENST00000517783 191 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ATG4DQ86TL0 NDUFA5P6-201ENST00000542110 379 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 MIR3121-201ENST00000579680 77 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 AL031274.2-201ENST00000599419 203 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 MIR6500-201ENST00000622700 86 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 snoZ196.1-201ENST00000625269 89 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 U6.95-201ENST00000636931 70 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 AC068647.2-201ENST00000637380 353 ntBASIC3.55□□□□□ -1.84
ATG4DQ86TL0 MIR3529-201ENST00000637713 78 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms