Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MIR514A3-201ENST00000385132 88 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 POLHP1-201ENST00000411806 470 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 AC012308.1-201ENST00000451232 178 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.35□□□□□ -2.03
NPHP3Q7Z494 AC117503.1-201ENST00000472241 394 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 MED28P2-201ENST00000475771 317 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 AC008526.1-201ENST00000509149 338 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 SNORD60.2-201ENST00000516883 86 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 AC079598.5-201ENST00000547460 117 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 SNORA4-201ENST00000584302 138 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
NPHP3Q7Z494 APOOP1-201ENST00000604695 592 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 AC092807.2-201ENST00000609367 243 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 DISC2.1-201ENST00000612827 205 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 SCARNA4-202ENST00000625402 129 ntBASIC2.35□□□□□ -2.03
NPHP3Q7Z494 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.35□□□□□ -2.03
NPHP3Q7Z494 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
NPHP3Q7Z494 RBBP8P1-201ENST00000449447 1844 ntBASIC2.34□□□□□ -2.03
NPHP3Q7Z494 RNU6-78P-201ENST00000362897 107 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 Y_RNA.167-201ENST00000363735 109 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 Y_RNA.231-201ENST00000364358 102 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 RNU4-52P-201ENST00000384209 138 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 RAP1BP3-201ENST00000407180 549 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 Y_RNA.615-201ENST00000410769 117 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 RNU2-63P-201ENST00000410792 194 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.34□□□□□ -2.04
NPHP3Q7Z494 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.34□□□□□ -2.04
NPHP3Q7Z494 RNU6-189P-201ENST00000516120 101 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 RNU5B-3P-201ENST00000516601 115 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 MIR3935-201ENST00000583472 104 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 Z82243.1-201ENST00000609432 473 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 AL121757.2-201ENST00000611223 313 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 AC245884.12-201ENST00000615364 59 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 AC007014.2-201ENST00000615581 479 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 AC009233.1-201ENST00000616477 371 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.34□□□□□ -2.04
NPHP3Q7Z494 DUXAP9-208ENST00000622815 614 ntBASIC2.34□□□□□ -2.04
NPHP3Q7Z494 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
NPHP3Q7Z494 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
NPHP3Q7Z494 MTND4P5-201ENST00000435821 1374 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 RNU6-522P-201ENST00000364497 107 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 SNORA16.1-201ENST00000364597 132 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 RNU6-534P-201ENST00000364877 106 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 Y_RNA.295-201ENST00000364918 102 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 RNU5E-7P-201ENST00000365290 117 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 RNU6-332P-201ENST00000391193 108 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 RN7SKP158-201ENST00000410453 326 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 SNORD56-201ENST00000413522 71 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AC009474.2-201ENST00000451383 136 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 TOMM22P6-201ENST00000465035 409 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 RPL7P43-201ENST00000478876 753 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AC083904.1-201ENST00000487828 231 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.33□□□□□ -2.04
NPHP3Q7Z494 SNORA14.1-201ENST00000516113 141 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AC023050.3-201ENST00000541142 333 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 CR383656.8-201ENST00000549046 145 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AC121758.2-201ENST00000553271 193 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 MIR5694-201ENST00000581190 76 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AP000907.4-201ENST00000604143 237 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 RNU6-85P-201ENST00000605989 107 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 RNU6-91P-201ENST00000607774 107 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 MIR5739-201ENST00000619803 80 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 AC097372.5-201ENST00000623665 376 ntBASIC2.33□□□□□ -2.04
NPHP3Q7Z494 SNORD56.1-201ENST00000362913 68 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 RNU6-428P-201ENST00000362942 107 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 RNU6-82P-201ENST00000363970 107 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 Y_RNA.373-201ENST00000365600 103 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 RNY1P14-201ENST00000384426 108 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 AC138623.1-201ENST00000418060 216 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.32□□□□□ -2.04
NPHP3Q7Z494 EIF1P1-201ENST00000421436 341 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHP3Q7Z494 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHP3Q7Z494 ERLEC1P1-201ENST00000433806 578 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 RNU6-1208P-201ENST00000459588 107 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 Y_RNA.654-201ENST00000497848 106 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 AC091885.1-201ENST00000506658 268 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.32□□□□□ -2.04
NPHP3Q7Z494 MTCYBP40-201ENST00000509390 1135 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 SNORA31.23-201ENST00000517219 133 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPHP3Q7Z494 MTND4LP26-201ENST00000518144 282 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.32□□□□□ -2.04
NPHP3Q7Z494 RPS15AP11-201ENST00000594193 385 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 AL645939.4-201ENST00000604495 135 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 AL355297.2-201ENST00000604792 129 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 AC103705.1-201ENST00000619013 241 ntBASIC2.32□□□□□ -2.04
NPHP3Q7Z494 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NPHP3Q7Z494 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.31□□□□□ -2.04
NPHP3Q7Z494 RNU1-72P-201ENST00000362976 153 ntBASIC2.31□□□□□ -2.04
NPHP3Q7Z494 RNU6-843P-201ENST00000384454 104 ntBASIC2.31□□□□□ -2.04
NPHP3Q7Z494 SNORD73A-201ENST00000386062 65 ntBASIC2.31□□□□□ -2.04
NPHP3Q7Z494 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
NPHP3Q7Z494 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms