Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL512604.1-201ENST00000404812 257 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 AL139413.1-201ENST00000421309 217 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 MTND4LP16-201ENST00000440828 295 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 SNORA59A-201ENST00000459326 152 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 RNA5SP24-201ENST00000516478 95 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 AC107953.1-201ENST00000522216 297 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 AL034555.1-201ENST00000604816 211 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 AL133215.3-201ENST00000609801 448 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 AC009248.2-201ENST00000619826 254 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 SNORD98-201ENST00000636377 67 ntBASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
NUP54Q7Z3B4 CASC19-280ENST00000642102 1351 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 SNORD114-30-201ENST00000364448 72 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 RNU6-933P-201ENST00000384424 107 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 U3.40-201ENST00000408706 208 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 AL356379.1-201ENST00000414105 126 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 MTCO3P46-201ENST00000425787 232 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 IFNA20P-201ENST00000436840 528 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 RBMX2P4-201ENST00000441256 376 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 AC245102.2-201ENST00000448956 180 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 AL137159.1-201ENST00000452808 512 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 MTND1P11-201ENST00000456661 876 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 RNU7-187P-201ENST00000458985 68 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 RNU4-49P-201ENST00000516080 140 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 AC087241.2-201ENST00000535801 324 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 AL022345.1-201ENST00000607292 135 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 AC067747.1-201ENST00000608026 250 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 AC090517.3-201ENST00000625170 141 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 AC009541.1-201ENST00000438279 2662 ntBASIC2.23□□□□□ -2.05
NUP54Q7Z3B4 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 RNU4-56P-201ENST00000364700 142 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 RNU6-142P-201ENST00000384019 107 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 EIF1AXP1-201ENST00000419267 435 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AL590135.1-201ENST00000422215 156 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AL590632.1-201ENST00000424289 371 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC019205.3-201ENST00000424573 156 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 MTND3P9-201ENST00000429526 346 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC016700.2-201ENST00000446011 156 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 RNU6-329P-201ENST00000459618 107 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC130509.1-201ENST00000464158 433 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC015911.1-201ENST00000495111 156 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 MTCO2P30-201ENST00000503662 364 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC091874.1-201ENST00000511402 339 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC016256.1-201ENST00000547971 354 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC007375.1-201ENST00000554513 578 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC011712.1-201ENST00000588959 234 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC078795.3-201ENST00000602913 472 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC005034.5-201ENST00000604219 466 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 MIR8076-201ENST00000611401 83 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 MIR1291-201ENST00000627649 87 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 SNORA43.4-201ENST00000629559 138 ntBASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
NUP54Q7Z3B4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 MIR449A-201ENST00000362113 91 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 Y_RNA.301-201ENST00000364990 103 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 RNU6-1274P-201ENST00000384557 107 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 MIR29C-201ENST00000385231 88 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AL591034.2-201ENST00000402839 359 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 RNA5SP181-201ENST00000410246 98 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 HMGB3P2-201ENST00000411913 584 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AC009963.1-201ENST00000417265 157 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AL590556.1-201ENST00000423231 483 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AC104564.1-201ENST00000493028 407 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 RN7SL636P-201ENST00000497504 294 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AC026436.1-201ENST00000510537 270 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 SNORA31.16-201ENST00000516773 139 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 RNU6-566P-201ENST00000516790 107 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 RNU6-1088P-201ENST00000516850 104 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AC021269.2-201ENST00000532318 330 ntBASIC2.21□□□□□ -2.06
NUP54Q7Z3B4 AC021231.3-201ENST00000558497 370 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms