Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.97□□□□□ -2.25
SCXQ7RTU7 AC015911.1-201ENST00000495111 156 ntBASIC0.97□□□□□ -2.25
SCXQ7RTU7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.97□□□□□ -2.25
SCXQ7RTU7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.97□□□□□ -2.25
SCXQ7RTU7 Y_RNA.673-201ENST00000516306 88 ntBASIC0.97□□□□□ -2.25
SCXQ7RTU7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.97□□□□□ -2.25
SCXQ7RTU7 AL161670.1-201ENST00000554348 137 ntBASIC0.97□□□□□ -2.25
SCXQ7RTU7 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.97□□□□□ -2.25
SCXQ7RTU7 MTCO3P23-201ENST00000561363 289 ntBASIC0.97□□□□□ -2.25
SCXQ7RTU7 MIR3923-201ENST00000579521 83 ntBASIC0.97□□□□□ -2.25
SCXQ7RTU7 MIR548AB-201ENST00000584917 84 ntBASIC0.97□□□□□ -2.25
SCXQ7RTU7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
SCXQ7RTU7 AP001506.1-201ENST00000615444 211 ntBASIC0.97□□□□□ -2.25
SCXQ7RTU7 AC068205.3-201ENST00000636385 468 ntBASIC0.97□□□□□ -2.25
SCXQ7RTU7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.97□□□□□ -2.25
SCXQ7RTU7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC0.97□□□□□ -2.25
SCXQ7RTU7 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SCXQ7RTU7 MIR302D-201ENST00000362275 68 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 RNU6-414P-201ENST00000363705 104 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 RNU6-1303P-201ENST00000364841 107 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 RNU6-434P-201ENST00000384376 107 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 MIR320A-201ENST00000385302 82 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 HMGN1P14-201ENST00000412459 517 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 MTCO3P41-201ENST00000414801 328 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 HIGD1AP15-201ENST00000416198 280 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC010099.3-201ENST00000423896 409 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SCXQ7RTU7 RPS27P16-201ENST00000425758 201 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 C8orf59P1-201ENST00000429930 303 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 AL033528.1-201ENST00000453780 140 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC007547.1-201ENST00000462177 490 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 RPL26P26-201ENST00000480251 434 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC079382.1-201ENST00000493346 557 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 SNORA31.16-201ENST00000516773 139 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 RNA5SP503-201ENST00000517047 117 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 RNU6-232P-201ENST00000517144 64 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC109446.2-201ENST00000567872 497 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 MIR5094-201ENST00000578766 85 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC110760.3-201ENST00000598794 467 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC012507.3-201ENST00000603556 477 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC091805.2-201ENST00000603848 235 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 RPL17P51-201ENST00000605218 238 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC006566.1-201ENST00000608943 513 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 PCGEM1.1-201ENST00000613431 131 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SCXQ7RTU7 AC008250.2-201ENST00000615261 205 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 MIR8063-201ENST00000621930 81 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 ZNF209P-201ENST00000593450 2304 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.96□□□□□ -2.26
SCXQ7RTU7 MTND4P14-201ENST00000435799 1354 ntBASIC0.96□□□□□ -2.26
SCXQ7RTU7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SCXQ7RTU7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
SCXQ7RTU7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SCXQ7RTU7 RNU6-428P-201ENST00000362942 107 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 SNORA7.1-201ENST00000363750 139 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 U3.9-201ENST00000363823 204 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 RNU6-553P-201ENST00000364047 96 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 Y_RNA.327-201ENST00000365201 102 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 RNU4-48P-201ENST00000365559 182 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 RNU6-1029P-201ENST00000384109 107 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 RNU6-393P-201ENST00000384475 107 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 RNU6-360P-201ENST00000390944 104 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 MIR1287-201ENST00000408492 90 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.95□□□□□ -2.26
SCXQ7RTU7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.95□□□□□ -2.26
SCXQ7RTU7 AL354695.1-201ENST00000427935 228 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 AL135790.2-201ENST00000437701 267 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.95□□□□□ -2.26
SCXQ7RTU7 MTND1P18-201ENST00000448191 573 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 RPS27AP8-201ENST00000452665 445 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.95□□□□□ -2.26
SCXQ7RTU7 RPL31P3-201ENST00000458430 332 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.95□□□□□ -2.26
SCXQ7RTU7 AC097473.1-201ENST00000508142 408 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 ATP5EP1-201ENST00000510257 156 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.95□□□□□ -2.26
SCXQ7RTU7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.95□□□□□ -2.26
SCXQ7RTU7 RNU2-69P-201ENST00000516061 100 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 SNORD60.2-201ENST00000516883 86 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 SNORA25.17-201ENST00000517184 124 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.95□□□□□ -2.26
SCXQ7RTU7 AC109446.1-201ENST00000566172 220 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 AC005668.1-201ENST00000571142 476 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 MIR4421-201ENST00000578133 69 ntBASIC0.95□□□□□ -2.26
SCXQ7RTU7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.95□□□□□ -2.26
SCXQ7RTU7 MIR3908-201ENST00000579798 126 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms