Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.49□□□□□ -2.01
SHFQ7M4L6 SCARNA4-201ENST00000629045 128 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 SNORD98-201ENST00000636377 67 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.49□□□□□ -2.01
SHFQ7M4L6 MIR422A-201ENST00000362286 90 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 Y_RNA.252-201ENST00000364556 101 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SHFQ7M4L6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.48□□□□□ -2.01
SHFQ7M4L6 MICF-203ENST00000432679 129 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.48□□□□□ -2.01
SHFQ7M4L6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.48□□□□□ -2.01
SHFQ7M4L6 RPL30P10-201ENST00000488148 337 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 AC021146.2-201ENST00000504736 556 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 AC105758.1-201ENST00000506038 399 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 RNU2-53P-201ENST00000516257 147 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 SNORA74D-201ENST00000516404 141 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.48□□□□□ -2.01
SHFQ7M4L6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.48□□□□□ -2.01
SHFQ7M4L6 ANP32BP3-201ENST00000559213 706 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 AC103810.1-201ENST00000579873 453 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 MIR4444-1-201ENST00000581696 74 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 MIR4444-2-201ENST00000584390 74 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 AC007742.2-201ENST00000618226 398 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 AC010297.1-201ENST00000623948 149 ntBASIC2.48□□□□□ -2.01
SHFQ7M4L6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHFQ7M4L6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SHFQ7M4L6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.47□□□□□ -2.01
SHFQ7M4L6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
SHFQ7M4L6 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SHFQ7M4L6 SNORA71.3-201ENST00000362582 128 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 RNU6-655P-201ENST00000362858 107 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 RNU6-486P-201ENST00000363116 107 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 RNU6-1210P-201ENST00000363775 107 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 RNU4-9P-201ENST00000364951 139 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 Y_RNA.577-201ENST00000384794 101 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 MIR592-201ENST00000384959 97 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 MIR670-201ENST00000390142 98 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 SNORA12.2-201ENST00000391040 156 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 RPL30P4-201ENST00000429309 333 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.47□□□□□ -2.01
SHFQ7M4L6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.47□□□□□ -2.01
SHFQ7M4L6 snoU13.6-201ENST00000458785 104 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 RN7SKP210-201ENST00000459176 261 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 AC087477.1-201ENST00000465747 340 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 HMGB1P35-201ENST00000503360 598 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 Y_RNA.711-201ENST00000516993 102 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 RN7SKP57-201ENST00000517248 293 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 AP003072.1-201ENST00000531740 145 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 MIR3136-201ENST00000583498 78 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 Z98751.3-201ENST00000604447 521 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.47□□□□□ -2.01
SHFQ7M4L6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SHFQ7M4L6 MIR3651-201ENST00000630427 90 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 AC010329.5-201ENST00000623497 2174 ntBASIC2.47□□□□□ -2.01
SHFQ7M4L6 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHFQ7M4L6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
SHFQ7M4L6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SHFQ7M4L6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SHFQ7M4L6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
SHFQ7M4L6 OR56A5-201ENST00000340110 738 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 RNU6-874P-201ENST00000362390 105 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 RNU1-72P-201ENST00000362976 153 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 Y_RNA.405-201ENST00000383979 100 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 Y_RNA.451-201ENST00000384200 100 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 Y_RNA.524-201ENST00000384564 100 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 Y_RNA.561-201ENST00000384694 100 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 RNU6-1156P-201ENST00000410365 100 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.46□□□□□ -2.02
SHFQ7M4L6 AC092017.2-201ENST00000427600 362 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.46□□□□□ -2.02
SHFQ7M4L6 AL035666.1-201ENST00000446195 348 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 snoU13.30-201ENST00000458951 104 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 RPL23AP70-201ENST00000483361 460 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 Y_RNA.661-201ENST00000516003 99 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 AC004584.2-201ENST00000570407 410 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 AC104581.2-201ENST00000572227 430 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.46□□□□□ -2.02
SHFQ7M4L6 RPL23AP78-201ENST00000599928 470 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 AL034555.1-201ENST00000604816 211 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.46□□□□□ -2.02
SHFQ7M4L6 MIR1244-1-201ENST00000612829 85 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 MIR1244-3-201ENST00000635744 85 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 MIR1244-2-201ENST00000636449 85 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 MIR1244-4-202ENST00000636813 85 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.46□□□□□ -2.02
SHFQ7M4L6 AC080128.1-201ENST00000474389 1917 ntBASIC2.46□□□□□ -2.02
SHFQ7M4L6 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.46□□□□□ -2.02
SHFQ7M4L6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.46□□□□□ -2.02
SHFQ7M4L6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
SHFQ7M4L6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SHFQ7M4L6 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.45□□□□□ -2.02
SHFQ7M4L6 RNA5SP374-201ENST00000362939 125 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 Y_RNA.326-201ENST00000365176 113 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 DEFA7P-201ENST00000382676 285 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 MIR218-1-201ENST00000384999 110 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 RNA5SP210-201ENST00000391034 120 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 RNU6-700P-201ENST00000391043 107 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 CBX3P9-201ENST00000402326 552 ntBASIC2.45□□□□□ -2.02
SHFQ7M4L6 AC012306.1-201ENST00000423267 114 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms