Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
TRIM40Q6P9F5 AL354685.2-201ENST00000448218 1447 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 RNA5SP432-201ENST00000362480 116 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 RNU4-56P-201ENST00000364700 142 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 RNU5A-6P-201ENST00000384136 116 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 RNU6-1103P-201ENST00000384150 107 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 RNA5SP213-201ENST00000391031 106 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 SNORA26.3-201ENST00000391119 136 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 MTCYBP2-201ENST00000407745 171 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 MTCYBP8-201ENST00000422855 651 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 RPL23AP95-201ENST00000426806 265 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 AC010493.1-201ENST00000513479 292 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 RNA5SP490-201ENST00000517141 136 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 HSPE1P4-201ENST00000550617 308 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 uc_338.5-201ENST00000611839 155 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 Z69908.1-201ENST00000622603 247 ntBASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.51□□□□□ -2.17
TRIM40Q6P9F5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AP000568.1-201ENST00000282964 442 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AC092268.1-201ENST00000342691 405 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 RNU6-23P-201ENST00000363283 107 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 RNU6-996P-201ENST00000365438 107 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 RNU6-26P-201ENST00000383985 107 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AC068050.1-201ENST00000394891 380 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 POLHP1-201ENST00000411806 470 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AC009310.1-201ENST00000414414 451 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AC073464.1-201ENST00000429823 534 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AL133396.1-201ENST00000432048 687 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AL035666.1-201ENST00000446195 348 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AC073415.1-201ENST00000449240 153 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 RNU7-180P-201ENST00000459240 63 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 SNORD13-201ENST00000459299 104 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 RNA5SP57-201ENST00000459463 123 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 MTND3P12-201ENST00000559068 328 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AC073648.5-201ENST00000603502 305 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 AL391646.1-201ENST00000603860 190 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 ZNF72P-201ENST00000425869 1908 ntBASIC1.5□□□□□ -2.17
TRIM40Q6P9F5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 RNA5SP493-201ENST00000364115 91 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 Y_RNA.332-201ENST00000365271 113 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 SNORA48.1-201ENST00000390879 135 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 RNA5SP201-201ENST00000410316 124 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 VN1R108P-201ENST00000431580 830 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 MTND1P26-201ENST00000440488 538 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 HMGN2P18-201ENST00000450680 270 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 AC016632.1-201ENST00000503994 196 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 AC087441.2-201ENST00000529141 262 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 GNAI2P1-201ENST00000541815 315 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 AC090115.3-201ENST00000553218 849 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 MIR3169-201ENST00000578032 83 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 AC010928.2-201ENST00000588017 287 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 AC078795.3-201ENST00000602913 472 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 AC012507.3-201ENST00000603556 477 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 AP001836.1-201ENST00000604675 523 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 RMST_6.1-201ENST00000611980 203 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 AC130454.1-201ENST00000622948 401 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 MIR3974-201ENST00000637126 96 ntBASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
TRIM40Q6P9F5 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 CBX3P1-201ENST00000325243 554 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 MIR517C-201ENST00000385103 95 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 AL033519.2-201ENST00000403958 392 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 AC090960.1-201ENST00000421072 306 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 MTCO2P19-201ENST00000427513 598 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 FTH1P25-201ENST00000447665 469 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 AC005741.1-201ENST00000511094 432 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 MIR3923-201ENST00000579521 83 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 AC004223.2-201ENST00000590309 544 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 RNU6-85P-201ENST00000605989 107 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 AC103810.8-201ENST00000607347 118 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 AL590240.4-201ENST00000616908 390 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 uc_338.34-201ENST00000617467 174 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 LINC02555-201ENST00000563933 1951 ntBASIC1.48□□□□□ -2.17
TRIM40Q6P9F5 ELL2P3-201ENST00000457883 1602 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms