Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.53□□□□□ -2
CCDC30Q5VVM6 Y_RNA.6-201ENST00000362350 114 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 RNU6-944P-201ENST00000364023 107 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 RNU6-1090P-201ENST00000364065 94 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 RNA5SP160-201ENST00000364866 120 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.53□□□□□ -2
CCDC30Q5VVM6 SNORA40.19-201ENST00000390846 128 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 MIR1289-2-201ENST00000408360 111 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 HMGN2P38-201ENST00000423806 265 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 UBE2V1P4-201ENST00000425374 344 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.53□□□□□ -2
CCDC30Q5VVM6 AC090255.1-201ENST00000495779 349 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 AC114801.2-201ENST00000503825 781 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.53□□□□□ -2
CCDC30Q5VVM6 Y_RNA.665-201ENST00000516177 98 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 SCOCP1-201ENST00000554676 349 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.53□□□□□ -2
CCDC30Q5VVM6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC30Q5VVM6 AC064836.2-201ENST00000609491 462 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 FAM157A-202ENST00000615155 405 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 AL132822.1-201ENST00000617063 513 ntBASIC2.53□□□□□ -2
CCDC30Q5VVM6 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CCDC30Q5VVM6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AL596028.1-201ENST00000326971 197 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 RNU6-128P-201ENST00000383976 107 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 Y_RNA.554-201ENST00000384672 102 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 Y_RNA.597-201ENST00000410463 100 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AL590135.1-201ENST00000422215 156 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AC019205.3-201ENST00000424573 156 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 MRPS10P2-201ENST00000431226 381 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AC016700.2-201ENST00000446011 156 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 U8.21-201ENST00000459536 136 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AC083904.1-201ENST00000487828 231 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AC015911.1-201ENST00000495111 156 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 SNORA4.4-201ENST00000515921 135 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 RNU6-567P-201ENST00000516746 107 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 RNU6-612P-201ENST00000516909 102 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 RNU6-667P-201ENST00000517186 102 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 MTND1P35-201ENST00000526739 508 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AC016256.1-201ENST00000547971 354 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 AC078899.2-201ENST00000595282 212 ntBASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC30Q5VVM6 RNU4-15P-201ENST00000362613 141 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 RNU6-227P-201ENST00000362865 103 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 Y_RNA.100-201ENST00000363141 102 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 Y_RNA.530-201ENST00000384587 101 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 BTF3L4P2-201ENST00000392798 346 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 MIR450B-201ENST00000401182 78 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 MTCYBP2-201ENST00000407745 171 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 RNA5SP118-201ENST00000410385 109 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 IFNA20P-201ENST00000436840 528 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 RPL23AP7-203ENST00000449021 469 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 SNRPGP7-201ENST00000469016 106 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 AC008628.2-201ENST00000502605 298 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 RNU7-193P-201ENST00000516723 65 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 TRAV32-201ENST00000553993 340 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 AC021231.3-201ENST00000558497 370 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 AC233702.2-202ENST00000562547 291 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 AC104458.1-201ENST00000608243 463 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.51□□□□□ -2.01
CCDC30Q5VVM6 RNU6-254P-201ENST00000363377 107 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 SNORD113-7-201ENST00000363762 77 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 RNA5SP37-201ENST00000365420 130 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 AC019129.1-201ENST00000403786 261 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 SNORD23.1-201ENST00000408212 104 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 Y_RNA.615-201ENST00000410769 117 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 AL137159.1-201ENST00000452808 512 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 AC132942.1-201ENST00000486753 483 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 RNU1-40P-201ENST00000516816 164 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 RNU1-97P-201ENST00000516872 164 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 AC007375.1-201ENST00000554513 578 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 MIR3923-201ENST00000579521 83 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 AC002984.1-201ENST00000591692 448 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 AC012640.5-201ENST00000623897 319 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 AC024614.3-201ENST00000637860 256 ntBASIC2.5□□□□□ -2.01
CCDC30Q5VVM6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 Y_RNA.89-201ENST00000363031 102 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 SNORD32B-201ENST00000364460 84 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 RNU4-12P-201ENST00000365233 139 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 U8.13-201ENST00000390842 128 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 ZNF885P-201ENST00000420174 1098 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 RPL9P9-202ENST00000466501 579 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 AC092436.3-201ENST00000511788 257 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 AC025465.4-201ENST00000513422 638 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 SNORA31.25-201ENST00000517242 134 ntBASIC2.49□□□□□ -2.01
CCDC30Q5VVM6 AC104576.1-201ENST00000524225 88 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms