Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF20Q5VTR2 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF20Q5VTR2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF20Q5VTR2 SNORA31-201ENST00000362607 130 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 RNU6-801P-201ENST00000364087 105 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 RNU6-454P-201ENST00000364292 107 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 RNU4-11P-201ENST00000365287 132 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 MIR320B2-201ENST00000408479 138 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 MIR1183-201ENST00000408856 89 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 RN7SKP177-201ENST00000410567 355 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 YPEL5P1-201ENST00000419731 367 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 AL117339.2-201ENST00000430475 180 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF20Q5VTR2 AC023141.12-201ENST00000512399 199 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 RNU2-12P-201ENST00000517216 168 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.58□□□□□ -1.68
RNF20Q5VTR2 AL606490.9-201ENST00000603331 271 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 SNRPGP20-201ENST00000604477 205 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 AC069294.1-201ENST00000608397 350 ntBASIC4.58□□□□□ -1.68
RNF20Q5VTR2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.58□□□□□ -1.68
RNF20Q5VTR2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF20Q5VTR2 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RNF20Q5VTR2 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
RNF20Q5VTR2 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 AC134026.1-201ENST00000623249 2239 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 RNU6-270P-201ENST00000364131 105 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 RNA5SP205-201ENST00000364653 136 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 RNU1-64P-201ENST00000365443 163 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 Z98941.1-201ENST00000407764 100 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 EBAG9P1-201ENST00000418955 543 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 RN7SL93P-201ENST00000463035 293 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 AIG1P1-201ENST00000503376 148 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 AC115990.1-201ENST00000526957 301 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 AP004242.1-201ENST00000533701 349 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 AL356575.1-201ENST00000603008 283 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
RNF20Q5VTR2 AC106871.1-201ENST00000568324 3102 ntBASIC4.57□□□□□ -1.68
RNF20Q5VTR2 AC068700.1-201ENST00000565862 3754 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AF127577.6-201ENST00000623352 2191 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 Y_RNA.293-201ENST00000364908 93 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 Y_RNA.353-201ENST00000365440 108 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 RNU6-578P-201ENST00000390980 103 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 SNORA26.5-201ENST00000391215 123 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 HMGN2P8-201ENST00000391458 268 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 CBX3P9-201ENST00000402326 552 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AL133475.1-201ENST00000404414 305 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 MTND4LP9-201ENST00000427694 174 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AL135790.2-201ENST00000437701 267 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 RN7SL385P-201ENST00000468873 276 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AC114982.1-201ENST00000469402 321 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 TRBV12-2-201ENST00000489763 344 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 RNU7-121P-201ENST00000516604 62 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 RN7SKP209-201ENST00000516888 304 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AC022616.8-201ENST00000533569 253 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 MIR4431-201ENST00000579990 94 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 MIR4744-201ENST00000581563 82 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AL359881.1-201ENST00000602916 267 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 MIR3658-201ENST00000636291 56 ntBASIC4.56□□□□□ -1.68
RNF20Q5VTR2 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RNF20Q5VTR2 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RNF20Q5VTR2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF20Q5VTR2 MIR372-201ENST00000362225 67 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 RNU6-1048P-201ENST00000364054 107 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 Y_RNA.218-201ENST00000364218 104 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 snoU2_19.4-201ENST00000364329 80 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 RNU6-44P-201ENST00000384045 107 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RNF20Q5VTR2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.55□□□□□ -1.68
RNF20Q5VTR2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.55□□□□□ -1.68
RNF20Q5VTR2 AL137159.1-201ENST00000452808 512 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 AC084357.1-201ENST00000473404 255 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 RNU5F-2P-201ENST00000516066 82 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 RN7SKP164-201ENST00000516138 266 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 RNU6-1333P-201ENST00000516162 93 ntBASIC4.55□□□□□ -1.68
RNF20Q5VTR2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms