Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 AC112206.4-201ENST00000515142 405 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC087854.1-201ENST00000519706 414 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 HMGB1P33-201ENST00000563485 527 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC109446.1-201ENST00000566172 220 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 TMF1P1-201ENST00000576058 373 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC073539.2-201ENST00000597113 165 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC069114.2-201ENST00000604699 304 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 AC080013.3-201ENST00000606839 578 ntBASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.68□□□□□ -2.3
ARFGEF3Q5TH69 MIR424-201ENST00000362227 98 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL358176.2-201ENST00000425769 204 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL009048.1-201ENST00000450437 298 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL139824.2-201ENST00000458731 1095 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 SNORA43.2-201ENST00000516652 128 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL356057.1-201ENST00000533798 831 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AP003034.1-201ENST00000534621 422 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 BNIP3P6-201ENST00000549284 499 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AC103996.1-201ENST00000555468 102 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AC078795.2-201ENST00000602835 1252 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AC018889.1-201ENST00000605372 397 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AP002360.4-201ENST00000606980 481 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AC093648.1-201ENST00000623546 606 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 SNORD56.2-201ENST00000363242 71 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-960P-201ENST00000364056 120 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 HSFY7P-201ENST00000432672 318 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 SNAP23P1-201ENST00000433229 246 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 HSFY8P-201ENST00000437934 318 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AC013470.1-201ENST00000453438 462 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 HSFY5P-201ENST00000453726 309 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL163195.1-201ENST00000496941 348 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 MTATP6P15-201ENST00000527233 835 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 RRN3P3-201ENST00000549207 578 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 ZNF321P-202ENST00000550843 495 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AL139286.2-201ENST00000606838 396 ntBASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.67□□□□□ -2.3
ARFGEF3Q5TH69 Y_RNA.22-201ENST00000362492 102 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-271P-201ENST00000363858 105 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-105P-201ENST00000363909 104 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 RNU4-68P-201ENST00000364314 141 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-17P-201ENST00000384245 107 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-18P-201ENST00000384527 107 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 MRPL35P3-201ENST00000421557 364 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 CBX3P6-201ENST00000430257 527 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 GTF2IP13-201ENST00000438487 386 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 RPS23P4-201ENST00000487908 423 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AP002453.2-201ENST00000533503 320 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC005786.1-201ENST00000588553 154 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC100821.1-201ENST00000523153 2479 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-23P-201ENST00000363283 107 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 RNU6-39P-201ENST00000384344 107 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 MIR1-2-201ENST00000384961 85 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 GPR143P-201ENST00000434155 205 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 UBE2V1P8-201ENST00000437166 265 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC006026.2-201ENST00000457376 180 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 MTCO2P6-201ENST00000463134 685 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC021146.2-201ENST00000504736 556 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC108078.1-201ENST00000508073 725 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC022616.6-201ENST00000520479 119 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 MIR5692A1-201ENST00000580523 69 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC005771.1-201ENST00000585581 349 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 AC008751.2-201ENST00000597885 980 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 SNORD98-201ENST00000636377 67 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 MIR924-201ENST00000638017 53 ntBASIC0.66□□□□□ -2.3
ARFGEF3Q5TH69 RNU4-15P-201ENST00000362613 141 ntBASIC0.65□□□□□ -2.31
ARFGEF3Q5TH69 snoU2-30.2-201ENST00000362805 70 ntBASIC0.65□□□□□ -2.31
ARFGEF3Q5TH69 RNU6-112P-201ENST00000363599 104 ntBASIC0.65□□□□□ -2.31
ARFGEF3Q5TH69 RNU1-96P-201ENST00000364163 162 ntBASIC0.65□□□□□ -2.31
ARFGEF3Q5TH69 RNU6-384P-201ENST00000364900 104 ntBASIC0.65□□□□□ -2.31
ARFGEF3Q5TH69 RNU6-716P-201ENST00000365621 103 ntBASIC0.65□□□□□ -2.31
ARFGEF3Q5TH69 RNU6-1029P-201ENST00000384109 107 ntBASIC0.65□□□□□ -2.31
ARFGEF3Q5TH69 RNU6-843P-201ENST00000384454 104 ntBASIC0.65□□□□□ -2.31
ARFGEF3Q5TH69 MIR122-201ENST00000385044 85 ntBASIC0.65□□□□□ -2.31
ARFGEF3Q5TH69 AC139712.2-201ENST00000424302 339 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms