Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNA5SP401-201ENST00000515920 127 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 SNORA14.1-201ENST00000516113 141 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 AC069113.1-201ENST00000517763 267 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.56□□□□□ -2.16
RFX4Q33E94 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.56□□□□□ -2.16
RFX4Q33E94 CENPUP1-201ENST00000526649 1202 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 AP005597.4-201ENST00000526762 229 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.56□□□□□ -2.16
RFX4Q33E94 HSBP1P1-201ENST00000555205 166 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 AC018889.1-201ENST00000605372 397 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 AC092954.2-201ENST00000609103 430 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 AC068944.2-201ENST00000610373 403 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.56□□□□□ -2.16
RFX4Q33E94 RN7SL853P-201ENST00000617250 223 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
RFX4Q33E94 SNORD114-1-201ENST00000362705 72 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 SNORD115-3-201ENST00000363100 82 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 RNU6-743P-201ENST00000364151 106 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 RNU6-1322P-201ENST00000364309 107 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 SNORD32B-201ENST00000364460 84 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 RNU4-24P-201ENST00000364565 139 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 RNU4-42P-201ENST00000364738 142 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 RNU6-1042P-201ENST00000384204 107 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 MIR1283-2-201ENST00000408621 87 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 POLHP1-201ENST00000411806 470 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.55□□□□□ -2.16
RFX4Q33E94 OOSP1P1-201ENST00000423265 274 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.55□□□□□ -2.16
RFX4Q33E94 DLGAP5P1-201ENST00000430307 464 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AC244670.1-201ENST00000436879 112 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.55□□□□□ -2.16
RFX4Q33E94 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.55□□□□□ -2.16
RFX4Q33E94 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.55□□□□□ -2.16
RFX4Q33E94 RNU7-138P-201ENST00000459479 64 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AC145146.1-201ENST00000496370 254 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AC079140.5-201ENST00000507882 310 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 MTND3P5-201ENST00000512798 333 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 MIR449C-201ENST00000516047 92 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 RNU6-189P-201ENST00000516120 101 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 RNU1-41P-201ENST00000516161 162 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 RNU1-48P-201ENST00000516400 162 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.55□□□□□ -2.16
RFX4Q33E94 AC115990.1-201ENST00000526957 301 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AC024909.2-201ENST00000553035 286 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.55□□□□□ -2.16
RFX4Q33E94 MIR3945-201ENST00000581853 98 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 MIR3941-201ENST00000582572 103 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.55□□□□□ -2.16
RFX4Q33E94 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RFX4Q33E94 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AC103705.1-201ENST00000619013 241 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 SNORA43.4-201ENST00000629559 138 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
RFX4Q33E94 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.55□□□□□ -2.16
RFX4Q33E94 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RFX4Q33E94 RNU4-66P-201ENST00000365199 138 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 MIR514A2-201ENST00000385131 88 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 MIR514A3-201ENST00000385132 88 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 SNORD37.1-201ENST00000390968 65 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 SNORA26.3-201ENST00000391119 136 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 RN7SKP61-201ENST00000410642 295 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.54□□□□□ -2.16
RFX4Q33E94 AL590135.1-201ENST00000422215 156 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 BX510359.4-201ENST00000423750 193 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AC019205.3-201ENST00000424573 156 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.54□□□□□ -2.16
RFX4Q33E94 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.54□□□□□ -2.16
RFX4Q33E94 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.54□□□□□ -2.16
RFX4Q33E94 AC016700.2-201ENST00000446011 156 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 SRRM1P2-201ENST00000464531 1192 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.54□□□□□ -2.16
RFX4Q33E94 AC015911.1-201ENST00000495111 156 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AC107401.1-201ENST00000503426 685 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AC019235.1-201ENST00000503847 207 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 PTP4A1P4-201ENST00000512479 322 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 RNU6-1069P-201ENST00000516612 133 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 Y_RNA.693-201ENST00000516641 110 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.54□□□□□ -2.16
RFX4Q33E94 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.54□□□□□ -2.16
RFX4Q33E94 AK6P1-201ENST00000540219 478 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 HSPE1P4-201ENST00000550617 308 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.54□□□□□ -2.16
RFX4Q33E94 AC026271.5-201ENST00000577873 130 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.54□□□□□ -2.16
RFX4Q33E94 AC092747.3-201ENST00000603769 301 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AP001836.1-201ENST00000604675 523 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AC064836.2-201ENST00000609491 462 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 AL121757.2-201ENST00000611223 313 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 uc_338.5-201ENST00000611839 155 ntBASIC1.54□□□□□ -2.16
RFX4Q33E94 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
RFX4Q33E94 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
RFX4Q33E94 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
RFX4Q33E94 WWP1P1-201ENST00000466609 2769 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
RFX4Q33E94 RNU6-1085P-201ENST00000363576 107 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 RNU6-1164P-201ENST00000364428 107 ntBASIC1.53□□□□□ -2.16
RFX4Q33E94 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
RFX4Q33E94 SNORA36A-201ENST00000384221 132 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms