Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.49□□□□□ -2.33
RFX7Q2KHR2 MIR3664-201ENST00000579074 99 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 AC005776.1-201ENST00000603164 290 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 MTATP6P2-201ENST00000603319 678 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 AL158163.2-201ENST00000619110 700 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 AC068880.4-201ENST00000623082 495 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 Z69720.2-201ENST00000624755 279 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 AC068647.2-201ENST00000637380 353 ntBASIC0.49□□□□□ -2.33
RFX7Q2KHR2 RNU6-462P-201ENST00000362659 105 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 RNU6-560P-201ENST00000364007 108 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 AC092809.3-201ENST00000415453 231 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.48□□□□□ -2.33
RFX7Q2KHR2 MTCO3P29-201ENST00000432119 779 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 AC069257.2-201ENST00000441819 155 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 snoU13.27-201ENST00000459278 104 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.48□□□□□ -2.33
RFX7Q2KHR2 RNU4-57P-201ENST00000515980 135 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 RNA5SP395-201ENST00000516567 118 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 AC091163.3-201ENST00000518269 1144 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 AC115990.1-201ENST00000526957 301 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.48□□□□□ -2.33
RFX7Q2KHR2 AC107304.1-201ENST00000604229 296 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
RFX7Q2KHR2 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.48□□□□□ -2.33
RFX7Q2KHR2 AC091948.2-201ENST00000636510 279 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
RFX7Q2KHR2 AL159152.1-201ENST00000635019 2587 ntBASIC0.48□□□□□ -2.33
RFX7Q2KHR2 RNU6-862P-201ENST00000362804 105 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 RNA5SP259-201ENST00000365541 109 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 RNY3P13-201ENST00000365542 102 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.47□□□□□ -2.33
RFX7Q2KHR2 RNU6-946P-201ENST00000383878 107 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 Y_RNA.412-201ENST00000384001 104 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 MIR10B-201ENST00000385011 110 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 ARL5AP1-201ENST00000418991 388 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 AC010099.3-201ENST00000423896 409 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 USP9YP11-201ENST00000427537 717 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.47□□□□□ -2.33
RFX7Q2KHR2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.47□□□□□ -2.33
RFX7Q2KHR2 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.47□□□□□ -2.33
RFX7Q2KHR2 AC109445.1-201ENST00000512356 383 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 SNORA62.5-201ENST00000516634 120 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.47□□□□□ -2.33
RFX7Q2KHR2 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.47□□□□□ -2.33
RFX7Q2KHR2 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.47□□□□□ -2.33
RFX7Q2KHR2 MTND3P13-201ENST00000574391 343 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 AC023932.2-201ENST00000603176 175 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 AL596327.1-201ENST00000603629 213 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 AL022154.1-201ENST00000604698 785 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 MIR3976-201ENST00000606807 139 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 AL354696.1-201ENST00000614652 497 ntBASIC0.47□□□□□ -2.33
RFX7Q2KHR2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.47□□□□□ -2.33
RFX7Q2KHR2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
RFX7Q2KHR2 SNORD32B-201ENST00000364460 84 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 Y_RNA.280-201ENST00000364765 112 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 RNU6-1176P-201ENST00000390955 107 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 SNORA12-201ENST00000391162 147 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.46□□□□□ -2.34
RFX7Q2KHR2 RPL23AP30-201ENST00000432419 501 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AC000111.3-201ENST00000433478 193 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AC099677.2-201ENST00000436385 175 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 GTF2IP13-201ENST00000438487 386 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AC112206.3-201ENST00000514578 389 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.46□□□□□ -2.34
RFX7Q2KHR2 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AC009712.1-201ENST00000564938 316 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AC068790.6-201ENST00000602558 258 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 RNU6-88P-201ENST00000606801 100 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AL451064.1-201ENST00000607718 471 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AC131235.4-201ENST00000609288 620 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 AC026585.1-201ENST00000619582 524 ntBASIC0.46□□□□□ -2.34
RFX7Q2KHR2 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.46□□□□□ -2.34
RFX7Q2KHR2 RNU6-527P-201ENST00000363425 104 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 RNU6-621P-201ENST00000364752 109 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 RNU5E-6P-201ENST00000365574 115 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 MIR544A-201ENST00000384855 91 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 MIR194-1-201ENST00000384892 85 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC006366.1-201ENST00000422002 759 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 RPL31P35-201ENST00000431058 377 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.45□□□□□ -2.34
RFX7Q2KHR2 MTND3P5-201ENST00000512798 333 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 MTCO3P27-201ENST00000514397 196 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC008507.2-201ENST00000588402 1176 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC018889.1-201ENST00000605372 397 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AL158032.1-201ENST00000605401 106 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AL359547.2-201ENST00000615810 418 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 SNORA63D-201ENST00000364359 132 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 RNU6-1179P-201ENST00000384667 107 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AL031577.2-201ENST00000404133 280 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.45□□□□□ -2.34
RFX7Q2KHR2 AC244023.1-201ENST00000426884 112 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 RPS25P9-201ENST00000435591 252 ntBASIC0.45□□□□□ -2.34
RFX7Q2KHR2 ART2BP-201ENST00000453501 499 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms