Protein–RNA interactions for Protein: Q15915

ZIC1, Zinc finger protein ZIC 1, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC1Q15915 FAM157A-202ENST00000615155 405 ntBASIC1.87□□□□□ -2.11
ZIC1Q15915 AC063943.3-201ENST00000615562 356 ntBASIC1.87□□□□□ -2.11
ZIC1Q15915 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ZIC1Q15915 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
ZIC1Q15915 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.87□□□□□ -2.11
ZIC1Q15915 AP000560.1-201ENST00000624150 1937 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 Y_RNA.573-201ENST00000384763 105 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 MIR504-201ENST00000385065 83 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 MIR764-201ENST00000390811 85 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 RN7SKP61-201ENST00000410642 295 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 RNU2-48P-201ENST00000410694 191 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 RNU2-32P-201ENST00000411193 191 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 HMGB3P2-201ENST00000411913 584 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AP000275.1-201ENST00000411943 390 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
ZIC1Q15915 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.86□□□□□ -2.11
ZIC1Q15915 AC244670.1-201ENST00000436879 112 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.86□□□□□ -2.11
ZIC1Q15915 RNU6-1037P-201ENST00000459571 107 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.86□□□□□ -2.11
ZIC1Q15915 AC022447.4-201ENST00000504053 364 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AC091874.1-201ENST00000511402 339 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.86□□□□□ -2.11
ZIC1Q15915 AP000763.2-201ENST00000540641 163 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ZIC1Q15915 HSPE1P4-201ENST00000550617 308 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AC110588.1-201ENST00000559699 137 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.86□□□□□ -2.11
ZIC1Q15915 AC233702.2-202ENST00000562547 291 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.86□□□□□ -2.11
ZIC1Q15915 AC104984.5-201ENST00000586878 94 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AL034555.1-201ENST00000604816 211 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AC018889.1-201ENST00000605372 397 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AC104458.1-201ENST00000608243 463 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AC068944.2-201ENST00000610373 403 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 RMST_3.1-201ENST00000611651 109 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AC022202.1-201ENST00000613515 211 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 SNORD98-201ENST00000636377 67 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 AC024614.3-201ENST00000637860 256 ntBASIC1.86□□□□□ -2.11
ZIC1Q15915 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ZIC1Q15915 MTND4P23-201ENST00000447723 1363 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.85□□□□□ -2.11
ZIC1Q15915 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.85□□□□□ -2.11
ZIC1Q15915 AP006437.1-201ENST00000641440 3685 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 Y_RNA.6-201ENST00000362350 114 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 RNA5SP138-201ENST00000365098 114 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 Y_RNA.373-201ENST00000365600 103 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZIC1Q15915 RNU6-546P-201ENST00000383991 107 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 RNU2-20P-201ENST00000410425 191 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 Y_RNA.597-201ENST00000410463 100 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 EDDM3CP-201ENST00000415977 425 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 SNRPEP10-201ENST00000420249 274 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 AL590135.1-201ENST00000422215 156 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 AC019205.3-201ENST00000424573 156 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.85□□□□□ -2.11
ZIC1Q15915 AC078809.1-201ENST00000427601 140 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 AL133396.1-201ENST00000432048 687 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 AC003989.2-201ENST00000440224 169 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 AC016700.2-201ENST00000446011 156 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 AC015911.1-201ENST00000495111 156 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 AC008628.2-201ENST00000502605 298 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 AC116337.1-201ENST00000509680 687 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 AC092436.3-201ENST00000511788 257 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 RNU6-1332P-201ENST00000516666 104 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 RNU7-193P-201ENST00000516723 65 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 SNORA31.16-201ENST00000516773 139 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 RNU6-667P-201ENST00000517186 102 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 AC018630.3-201ENST00000542637 96 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 TRAV32-201ENST00000553993 340 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 MIR3126-201ENST00000577443 74 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 MIR3136-201ENST00000583498 78 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 CTHRC1P1-201ENST00000605383 469 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 MIR7843-201ENST00000622274 79 ntBASIC1.85□□□□□ -2.11
ZIC1Q15915 RNU4-15P-201ENST00000362613 141 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 RNU6-254P-201ENST00000363377 107 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 RNU6-142P-201ENST00000384019 107 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 RNU6-214P-201ENST00000384130 107 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
ZIC1Q15915 SNORA26.3-201ENST00000391119 136 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 RNU6-332P-201ENST00000391193 108 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 MIR450B-201ENST00000401182 78 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 RNA5SP270-201ENST00000411361 118 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 AL590556.1-201ENST00000423231 483 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 HMGN2P38-201ENST00000423806 265 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC1Q15915 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.84□□□□□ -2.11
ZIC1Q15915 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.84□□□□□ -2.11
ZIC1Q15915 RNU6-612P-201ENST00000516909 102 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 MTND1P5-201ENST00000517906 940 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 AC022616.8-201ENST00000533569 253 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 NDUFA5P6-201ENST00000542110 379 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC1Q15915 MIR3124-201ENST00000582636 67 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.84□□□□□ -2.11
ZIC1Q15915 AC068790.6-201ENST00000602558 258 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 AC090517.2-201ENST00000614966 680 ntBASIC1.84□□□□□ -2.11
ZIC1Q15915 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
ZIC1Q15915 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
ZIC1Q15915 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms