Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
NR1H3Q13133 Y_RNA.368-201ENST00000365547 113 ntBASIC4.45□□□□□ -1.7
NR1H3Q13133 U8.12-201ENST00000384701 133 ntBASIC4.45□□□□□ -1.7
NR1H3Q13133 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NR1H3Q13133 AL355497.1-201ENST00000406262 551 ntBASIC4.45□□□□□ -1.7
NR1H3Q13133 RNA5SP39-201ENST00000411245 120 ntBASIC4.45□□□□□ -1.7
NR1H3Q13133 RPL35AP15-201ENST00000468042 339 ntBASIC4.45□□□□□ -1.7
NR1H3Q13133 SNORA25.12-201ENST00000516202 82 ntBASIC4.45□□□□□ -1.7
NR1H3Q13133 HSPE1P18-201ENST00000517602 280 ntBASIC4.45□□□□□ -1.7
NR1H3Q13133 AC074050.1-201ENST00000563247 211 ntBASIC4.45□□□□□ -1.7
NR1H3Q13133 AC034229.5-201ENST00000624258 185 ntBASIC4.45□□□□□ -1.7
NR1H3Q13133 AC008873.1-201ENST00000625051 138 ntBASIC4.45□□□□□ -1.7
NR1H3Q13133 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
NR1H3Q13133 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NR1H3Q13133 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NR1H3Q13133 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NR1H3Q13133 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NR1H3Q13133 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NR1H3Q13133 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NR1H3Q13133 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NR1H3Q13133 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NR1H3Q13133 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NR1H3Q13133 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.44□□□□□ -1.7
NR1H3Q13133 AL133243.3-201ENST00000617415 3004 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
NR1H3Q13133 Y_RNA.24-201ENST00000362508 103 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 RNU1-14P-201ENST00000362759 152 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 U3.8-201ENST00000363675 217 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 AL157831.1-201ENST00000426134 473 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 HMGN2P20-201ENST00000437531 273 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 SNRPGP5-201ENST00000456003 220 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 RPS26P15-201ENST00000488067 348 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 RN7SL691P-201ENST00000494487 301 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 RNU6-1007P-201ENST00000516586 107 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 RNA5SP73-201ENST00000516744 108 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 AC109810.1-201ENST00000534066 224 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.44□□□□□ -1.7
NR1H3Q13133 AC106785.1-201ENST00000565935 262 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.44□□□□□ -1.7
NR1H3Q13133 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.44□□□□□ -1.7
NR1H3Q13133 AC006133.1-201ENST00000617106 264 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.44□□□□□ -1.7
NR1H3Q13133 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NR1H3Q13133 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NR1H3Q13133 MAPK10-253ENST00000641010 4072 ntBASIC4.44□□□□□ -1.7
NR1H3Q13133 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NR1H3Q13133 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NR1H3Q13133 AC026241.1-201ENST00000517873 2142 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NR1H3Q13133 RNU6-199P-201ENST00000362954 107 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 Y_RNA.456-201ENST00000384232 111 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 SNORA37-201ENST00000384504 129 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 RNU6-750P-201ENST00000390946 107 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 RNU2-37P-201ENST00000410695 177 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
NR1H3Q13133 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.43□□□□□ -1.7
NR1H3Q13133 AC074290.1-201ENST00000448883 135 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 RPS29P2-201ENST00000479278 136 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 SRIP1-201ENST00000489235 288 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.43□□□□□ -1.7
NR1H3Q13133 RNU1-30P-201ENST00000606575 163 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 AC069528.2-201ENST00000624849 1991 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 AC068700.1-201ENST00000565862 3754 ntBASIC4.43□□□□□ -1.7
NR1H3Q13133 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
NR1H3Q13133 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.43□□□□□ -1.7
NR1H3Q13133 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
NR1H3Q13133 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.43□□□□□ -1.7
NR1H3Q13133 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.42□□□□□ -1.7
NR1H3Q13133 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.42□□□□□ -1.7
NR1H3Q13133 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.42□□□□□ -1.7
NR1H3Q13133 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
NR1H3Q13133 RNU6-1205P-201ENST00000363625 106 ntBASIC4.42□□□□□ -1.7
NR1H3Q13133 Y_RNA.337-201ENST00000365312 102 ntBASIC4.42□□□□□ -1.7
NR1H3Q13133 RNU1-57P-201ENST00000384491 166 ntBASIC4.42□□□□□ -1.7
NR1H3Q13133 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.42□□□□□ -1.7
NR1H3Q13133 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.42□□□□□ -1.7
NR1H3Q13133 AC099522.1-202ENST00000514718 367 ntBASIC4.42□□□□□ -1.7
NR1H3Q13133 SNORA70.12-201ENST00000516084 153 ntBASIC4.42□□□□□ -1.7
NR1H3Q13133 RNA5SP519-201ENST00000516480 119 ntBASIC4.42□□□□□ -1.7
NR1H3Q13133 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC4.42□□□□□ -1.7
NR1H3Q13133 MIR4286-201ENST00000580651 93 ntBASIC4.42□□□□□ -1.7
NR1H3Q13133 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.42□□□□□ -1.7
NR1H3Q13133 MIR7702-201ENST00000621931 59 ntBASIC4.42□□□□□ -1.7
NR1H3Q13133 U6.115-201ENST00000636045 103 ntBASIC4.42□□□□□ -1.7
NR1H3Q13133 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.42□□□□□ -1.7
NR1H3Q13133 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NR1H3Q13133 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H3Q13133 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NR1H3Q13133 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H3Q13133 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.41□□□□□ -1.7
NR1H3Q13133 UBE3AP2-201ENST00000429033 2259 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 RNU6-969P-201ENST00000383900 105 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 Y_RNA.572-201ENST00000384757 98 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 MIR616-201ENST00000385293 97 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 SNORA48.7-201ENST00000391302 135 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 AL139281.1-201ENST00000422120 335 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 RPL23AP46-201ENST00000438548 490 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 AL137159.1-201ENST00000452808 512 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 AC112771.1-201ENST00000463581 102 ntBASIC4.41□□□□□ -1.7
NR1H3Q13133 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms