Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC012065.4-201ENST00000602445 679 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 MIR3666-201ENST00000607845 111 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 AC009318.4-201ENST00000620496 486 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 AC120349.3-201ENST00000624377 529 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.9□□□□□ -2.55
TFF3Q07654 MTND4P4-201ENST00000439033 1366 ntBASIC-0.91□□□□□ -2.55
TFF3Q07654 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.91□□□□□ -2.56
TFF3Q07654 MIR587-201ENST00000384845 96 ntBASIC-0.91□□□□□ -2.56
TFF3Q07654 RNU6-269P-201ENST00000391077 97 ntBASIC-0.91□□□□□ -2.56
TFF3Q07654 AL133475.1-201ENST00000404414 305 ntBASIC-0.91□□□□□ -2.56
TFF3Q07654 AC060773.1-201ENST00000421698 310 ntBASIC-0.91□□□□□ -2.56
TFF3Q07654 AC008267.5-201ENST00000424928 265 ntBASIC-0.91□□□□□ -2.56
TFF3Q07654 U8.21-201ENST00000459536 136 ntBASIC-0.91□□□□□ -2.56
TFF3Q07654 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.91□□□□□ -2.56
TFF3Q07654 RN7SKP256-201ENST00000517201 314 ntBASIC-0.91□□□□□ -2.56
TFF3Q07654 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC-0.91□□□□□ -2.56
TFF3Q07654 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.91□□□□□ -2.56
TFF3Q07654 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.91□□□□□ -2.56
TFF3Q07654 RNA5SP517-201ENST00000364724 117 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 RNY1P7-201ENST00000384743 110 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 SNORD105-201ENST00000386910 85 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 AC007919.1-201ENST00000429380 217 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC-0.92□□□□□ -2.56
TFF3Q07654 AL392003.1-201ENST00000434394 243 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 MTND1P28-201ENST00000435623 950 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.92□□□□□ -2.56
TFF3Q07654 MTND2P24-201ENST00000453434 806 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 RNU7-159P-201ENST00000459284 62 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC-0.92□□□□□ -2.56
TFF3Q07654 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 AL451064.1-201ENST00000607718 471 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 AC015726.2-201ENST00000620112 122 ntBASIC-0.92□□□□□ -2.56
TFF3Q07654 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC-0.92□□□□□ -2.56
TFF3Q07654 RNU6-1019P-201ENST00000364424 107 ntBASIC-0.93□□□□□ -2.56
TFF3Q07654 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC-0.93□□□□□ -2.56
TFF3Q07654 RNU6-657P-201ENST00000383904 107 ntBASIC-0.93□□□□□ -2.56
TFF3Q07654 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.93□□□□□ -2.56
TFF3Q07654 AL034345.1-201ENST00000407768 123 ntBASIC-0.93□□□□□ -2.56
TFF3Q07654 MIR548H2-201ENST00000408874 88 ntBASIC-0.93□□□□□ -2.56
TFF3Q07654 ISCA1P1-201ENST00000426679 387 ntBASIC-0.93□□□□□ -2.56
TFF3Q07654 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.93□□□□□ -2.56
TFF3Q07654 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.93□□□□□ -2.56
TFF3Q07654 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.93□□□□□ -2.56
TFF3Q07654 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.93□□□□□ -2.56
TFF3Q07654 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.93□□□□□ -2.56
TFF3Q07654 AL356057.1-201ENST00000533798 831 ntBASIC-0.93□□□□□ -2.56
TFF3Q07654 AC011921.3-201ENST00000605540 361 ntBASIC-0.93□□□□□ -2.56
TFF3Q07654 PART1_2.1-201ENST00000612397 250 ntBASIC-0.93□□□□□ -2.56
TFF3Q07654 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.93□□□□□ -2.56
TFF3Q07654 LINC02555-201ENST00000563933 1951 ntBASIC-0.94□□□□□ -2.56
TFF3Q07654 SNORD82-201ENST00000365530 70 ntBASIC-0.94□□□□□ -2.56
TFF3Q07654 MIR1468-201ENST00000410600 86 ntBASIC-0.94□□□□□ -2.56
TFF3Q07654 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.94□□□□□ -2.56
TFF3Q07654 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC-0.94□□□□□ -2.56
TFF3Q07654 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.94□□□□□ -2.56
TFF3Q07654 RNU7-165P-201ENST00000458864 60 ntBASIC-0.94□□□□□ -2.56
TFF3Q07654 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.94□□□□□ -2.56
TFF3Q07654 RNU6-782P-201ENST00000516852 104 ntBASIC-0.94□□□□□ -2.56
TFF3Q07654 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC-0.94□□□□□ -2.56
TFF3Q07654 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.94□□□□□ -2.56
TFF3Q07654 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.95□□□□□ -2.56
TFF3Q07654 MIR18A-201ENST00000362310 71 ntBASIC-0.95□□□□□ -2.56
TFF3Q07654 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.95□□□□□ -2.56
TFF3Q07654 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.95□□□□□ -2.56
TFF3Q07654 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC-0.95□□□□□ -2.56
TFF3Q07654 COX6CP10-201ENST00000416832 224 ntBASIC-0.95□□□□□ -2.56
TFF3Q07654 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC-0.95□□□□□ -2.56
TFF3Q07654 AC069257.2-201ENST00000441819 155 ntBASIC-0.95□□□□□ -2.56
TFF3Q07654 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC-0.95□□□□□ -2.56
TFF3Q07654 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC-0.95□□□□□ -2.56
TFF3Q07654 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-0.95□□□□□ -2.56
TFF3Q07654 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC-0.95□□□□□ -2.56
TFF3Q07654 AC010376.1-201ENST00000522101 334 ntBASIC-0.95□□□□□ -2.56
TFF3Q07654 AK6P2-201ENST00000549020 471 ntBASIC-0.95□□□□□ -2.56
TFF3Q07654 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.95□□□□□ -2.56
TFF3Q07654 AL353997.4-201ENST00000586196 166 ntBASIC-0.95□□□□□ -2.56
TFF3Q07654 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC-0.95□□□□□ -2.56
TFF3Q07654 AL590632.1-201ENST00000424289 371 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 TXNL1P1-201ENST00000429528 554 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 AC002486.1-201ENST00000435098 391 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 RNU6-333P-201ENST00000459117 107 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 HMGN2P26-201ENST00000463169 339 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 RBBP4P6-201ENST00000508098 202 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 MTND5P13-201ENST00000513046 1079 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 RNU5B-3P-201ENST00000516601 115 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC-0.96□□□□□ -2.56
TFF3Q07654 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC-0.96□□□□□ -2.56
TFF3Q07654 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.96□□□□□ -2.56
TFF3Q07654 MIR4709-201ENST00000577272 72 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC-0.96□□□□□ -2.56
TFF3Q07654 AC239868.4-201ENST00000608318 671 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 MIR198-201ENST00000637333 62 ntBASIC-0.96□□□□□ -2.56
TFF3Q07654 RNU6-152P-201ENST00000384037 107 ntBASIC-0.97□□□□□ -2.56
TFF3Q07654 MIR573-201ENST00000384964 99 ntBASIC-0.97□□□□□ -2.56
TFF3Q07654 RNU6-127P-201ENST00000390897 107 ntBASIC-0.97□□□□□ -2.56
TFF3Q07654 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.97□□□□□ -2.56
TFF3Q07654 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC-0.97□□□□□ -2.56
TFF3Q07654 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC-0.97□□□□□ -2.56
TFF3Q07654 MTCO3P43-201ENST00000440974 771 ntBASIC-0.97□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms