Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 OSTCP8-201ENST00000445117 448 ntBASIC2.67□□□□□ -1.98
LTBQ06643 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.67□□□□□ -1.98
LTBQ06643 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.67□□□□□ -1.98
LTBQ06643 AC093852.1-201ENST00000503587 266 ntBASIC2.67□□□□□ -1.98
LTBQ06643 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.67□□□□□ -1.98
LTBQ06643 SNORA43.2-201ENST00000516652 128 ntBASIC2.67□□□□□ -1.98
LTBQ06643 RNU6-928P-201ENST00000516876 104 ntBASIC2.67□□□□□ -1.98
LTBQ06643 SNORA31.18-201ENST00000517043 134 ntBASIC2.67□□□□□ -1.98
LTBQ06643 AC144568.1-201ENST00000520139 137 ntBASIC2.67□□□□□ -1.98
LTBQ06643 AC020895.1-201ENST00000595362 272 ntBASIC2.67□□□□□ -1.98
LTBQ06643 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.67□□□□□ -1.98
LTBQ06643 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.67□□□□□ -1.98
LTBQ06643 U2.1-201ENST00000618978 145 ntBASIC2.67□□□□□ -1.98
LTBQ06643 AC097372.5-201ENST00000623665 376 ntBASIC2.67□□□□□ -1.98
LTBQ06643 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
LTBQ06643 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
LTBQ06643 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
LTBQ06643 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
LTBQ06643 RNU6-105P-201ENST00000363909 104 ntBASIC2.66□□□□□ -1.98
LTBQ06643 RNU6-270P-201ENST00000364131 105 ntBASIC2.66□□□□□ -1.98
LTBQ06643 SNORA71.1-201ENST00000364523 117 ntBASIC2.66□□□□□ -1.98
LTBQ06643 RNU6-806P-201ENST00000365147 105 ntBASIC2.66□□□□□ -1.98
LTBQ06643 RNU1-73P-201ENST00000383971 164 ntBASIC2.66□□□□□ -1.98
LTBQ06643 SNORA70B-201ENST00000384210 135 ntBASIC2.66□□□□□ -1.98
LTBQ06643 Y_RNA.551-201ENST00000384661 102 ntBASIC2.66□□□□□ -1.98
LTBQ06643 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LTBQ06643 Y_RNA.592-201ENST00000410274 109 ntBASIC2.66□□□□□ -1.98
LTBQ06643 Y_RNA.618-201ENST00000410949 107 ntBASIC2.66□□□□□ -1.98
LTBQ06643 RNA5SP344-201ENST00000411081 104 ntBASIC2.66□□□□□ -1.98
LTBQ06643 AC007098.1-201ENST00000420122 367 ntBASIC2.66□□□□□ -1.98
LTBQ06643 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LTBQ06643 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.66□□□□□ -1.98
LTBQ06643 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.66□□□□□ -1.98
LTBQ06643 AC073910.1-201ENST00000445047 438 ntBASIC2.66□□□□□ -1.98
LTBQ06643 MTATP6P7-201ENST00000453315 681 ntBASIC2.66□□□□□ -1.98
LTBQ06643 MTCO3P8-201ENST00000453691 755 ntBASIC2.66□□□□□ -1.98
LTBQ06643 RPL30P10-201ENST00000488148 337 ntBASIC2.66□□□□□ -1.98
LTBQ06643 RPS29P20-201ENST00000489592 171 ntBASIC2.66□□□□□ -1.98
LTBQ06643 MTND4LP22-201ENST00000508209 276 ntBASIC2.66□□□□□ -1.98
LTBQ06643 Y_RNA.668-201ENST00000516233 93 ntBASIC2.66□□□□□ -1.98
LTBQ06643 Y_RNA.676-201ENST00000516393 96 ntBASIC2.66□□□□□ -1.98
LTBQ06643 RNU6-1271P-201ENST00000517049 105 ntBASIC2.66□□□□□ -1.98
LTBQ06643 AMZ2P1-203ENST00000565833 850 ntBASIC2.66□□□□□ -1.98
LTBQ06643 AC024153.1-201ENST00000603103 365 ntBASIC2.66□□□□□ -1.98
LTBQ06643 AL133393.1-201ENST00000603277 287 ntBASIC2.66□□□□□ -1.98
LTBQ06643 RAC1P9-201ENST00000604990 392 ntBASIC2.66□□□□□ -1.98
LTBQ06643 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.66□□□□□ -1.98
LTBQ06643 AL138825.1-201ENST00000618587 192 ntBASIC2.66□□□□□ -1.98
LTBQ06643 MIR8062-201ENST00000621515 85 ntBASIC2.66□□□□□ -1.98
LTBQ06643 SCARNA4-202ENST00000625402 129 ntBASIC2.66□□□□□ -1.98
LTBQ06643 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.66□□□□□ -1.98
LTBQ06643 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.66□□□□□ -1.98
LTBQ06643 AP000560.1-201ENST00000624150 1937 ntBASIC2.66□□□□□ -1.98
LTBQ06643 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.66□□□□□ -1.98
LTBQ06643 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
LTBQ06643 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LTBQ06643 AC022336.2-201ENST00000568966 2538 ntBASIC2.65□□□□□ -1.99
LTBQ06643 RNU6-527P-201ENST00000363425 104 ntBASIC2.65□□□□□ -1.99
LTBQ06643 Y_RNA.152-201ENST00000363578 100 ntBASIC2.65□□□□□ -1.99
LTBQ06643 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.65□□□□□ -1.99
LTBQ06643 Y_RNA.405-201ENST00000383979 100 ntBASIC2.65□□□□□ -1.99
LTBQ06643 Y_RNA.451-201ENST00000384200 100 ntBASIC2.65□□□□□ -1.99
LTBQ06643 SNORA51.11-201ENST00000384442 131 ntBASIC2.65□□□□□ -1.99
LTBQ06643 Y_RNA.524-201ENST00000384564 100 ntBASIC2.65□□□□□ -1.99
LTBQ06643 Y_RNA.561-201ENST00000384694 100 ntBASIC2.65□□□□□ -1.99
LTBQ06643 SNORA69.1-201ENST00000390904 137 ntBASIC2.65□□□□□ -1.99
LTBQ06643 SAR1AP2-201ENST00000392696 594 ntBASIC2.65□□□□□ -1.99
LTBQ06643 RPS29P6-201ENST00000438196 145 ntBASIC2.65□□□□□ -1.99
LTBQ06643 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.65□□□□□ -1.99
LTBQ06643 AC109329.1-201ENST00000518744 317 ntBASIC2.65□□□□□ -1.99
LTBQ06643 AL590705.4-201ENST00000532209 134 ntBASIC2.65□□□□□ -1.99
LTBQ06643 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.65□□□□□ -1.99
LTBQ06643 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.65□□□□□ -1.99
LTBQ06643 AC090517.1-201ENST00000569307 266 ntBASIC2.65□□□□□ -1.99
LTBQ06643 MIR3609-201ENST00000582661 80 ntBASIC2.65□□□□□ -1.99
LTBQ06643 AC060766.3-201ENST00000591442 263 ntBASIC2.65□□□□□ -1.99
LTBQ06643 HSPE1P7-201ENST00000604681 321 ntBASIC2.65□□□□□ -1.99
LTBQ06643 MTND4LP5-201ENST00000605152 292 ntBASIC2.65□□□□□ -1.99
LTBQ06643 AC100812.1-201ENST00000607622 580 ntBASIC2.65□□□□□ -1.99
LTBQ06643 AC241585.2-209ENST00000638217 143 ntBASIC2.65□□□□□ -1.99
LTBQ06643 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.65□□□□□ -1.99
LTBQ06643 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
LTBQ06643 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.65□□□□□ -1.99
LTBQ06643 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
LTBQ06643 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
LTBQ06643 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.64□□□□□ -1.99
LTBQ06643 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LTBQ06643 MTND5P7-201ENST00000413558 1798 ntBASIC2.64□□□□□ -1.99
LTBQ06643 AC010680.1-201ENST00000590024 3590 ntBASIC2.64□□□□□ -1.99
LTBQ06643 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LTBQ06643 RNU1-35P-201ENST00000362782 153 ntBASIC2.64□□□□□ -1.99
LTBQ06643 Y_RNA.64-201ENST00000362845 102 ntBASIC2.64□□□□□ -1.99
LTBQ06643 RNU6-472P-201ENST00000384299 107 ntBASIC2.64□□□□□ -1.99
LTBQ06643 Y_RNA.556-201ENST00000384677 113 ntBASIC2.64□□□□□ -1.99
LTBQ06643 SNORA12.2-201ENST00000391040 156 ntBASIC2.64□□□□□ -1.99
LTBQ06643 MIR190B-201ENST00000401119 79 ntBASIC2.64□□□□□ -1.99
LTBQ06643 HMGN2P30-201ENST00000423237 256 ntBASIC2.64□□□□□ -1.99
LTBQ06643 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.64□□□□□ -1.99
LTBQ06643 AL031659.1-201ENST00000447075 539 ntBASIC2.64□□□□□ -1.99
LTBQ06643 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms