Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 RNU6-648P-201ENST00000410190 107 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.36□□□□□ -2.03
CALD1Q05682 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.36□□□□□ -2.03
CALD1Q05682 AC244670.1-201ENST00000436879 112 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 AC145146.1-201ENST00000496370 254 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CALD1Q05682 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.36□□□□□ -2.03
CALD1Q05682 Y_RNA.693-201ENST00000516641 110 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CALD1Q05682 AC018630.3-201ENST00000542637 96 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 HSPE1P4-201ENST00000550617 308 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 MIR4529-201ENST00000578110 78 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 AC007229.1-201ENST00000590455 412 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 VN1R107P-201ENST00000601784 209 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 SNRPGP17-201ENST00000603780 214 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 AC092954.2-201ENST00000609103 430 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 AC092807.2-201ENST00000609367 243 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 AC068944.2-201ENST00000610373 403 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 MIR6845-201ENST00000613182 61 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 AC103705.1-201ENST00000619013 241 ntBASIC2.36□□□□□ -2.03
CALD1Q05682 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
CALD1Q05682 MIR518A2-201ENST00000384966 87 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 MIR504-201ENST00000385065 83 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 MIR9-3-201ENST00000385084 90 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 AC007677.1-201ENST00000445757 515 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 MTND3P16-201ENST00000452205 344 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.35□□□□□ -2.03
CALD1Q05682 AC105313.1-201ENST00000509121 353 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 MIR449C-201ENST00000516047 92 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 AP005597.4-201ENST00000526762 229 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.35□□□□□ -2.03
CALD1Q05682 AC025423.5-201ENST00000550230 219 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 AC078899.2-201ENST00000595282 212 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 AC018889.1-201ENST00000605372 397 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 AL357078.3-201ENST00000607528 618 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.35□□□□□ -2.03
CALD1Q05682 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 MIR1248-201ENST00000629190 106 ntBASIC2.35□□□□□ -2.03
CALD1Q05682 RNU6-611P-201ENST00000384276 104 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 BTF3L4P2-201ENST00000392798 346 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 RNU6-1068P-201ENST00000410958 103 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 RNA5SP489-201ENST00000410986 109 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.34□□□□□ -2.03
CALD1Q05682 AC003989.2-201ENST00000440224 169 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.34□□□□□ -2.03
CALD1Q05682 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.34□□□□□ -2.03
CALD1Q05682 AC019235.1-201ENST00000503847 207 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.34□□□□□ -2.03
CALD1Q05682 AC116337.1-201ENST00000509680 687 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.34□□□□□ -2.03
CALD1Q05682 RNU6-323P-201ENST00000521915 107 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 AC104576.1-201ENST00000524225 88 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.34□□□□□ -2.03
CALD1Q05682 AC245505.1-201ENST00000556398 224 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 AC011494.1-201ENST00000596454 237 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 AP001836.1-201ENST00000604675 523 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 AC097065.2-201ENST00000608159 533 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 AC093783.1-201ENST00000612976 329 ntBASIC2.34□□□□□ -2.03
CALD1Q05682 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CALD1Q05682 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CALD1Q05682 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CALD1Q05682 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.33□□□□□ -2.04
CALD1Q05682 TIMM9P3-201ENST00000428659 274 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.33□□□□□ -2.04
CALD1Q05682 MTND1P1-201ENST00000445453 368 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.33□□□□□ -2.04
CALD1Q05682 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.33□□□□□ -2.04
CALD1Q05682 AC104564.1-201ENST00000493028 407 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 Y_RNA.654-201ENST00000497848 106 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 RNU6-1069P-201ENST00000516612 133 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.33□□□□□ -2.04
CALD1Q05682 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.33□□□□□ -2.04
CALD1Q05682 AK6P1-201ENST00000540219 478 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 TRAV32-201ENST00000553993 340 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 AC078795.3-201ENST00000602913 472 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 AC064836.2-201ENST00000609491 462 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 AC005296.1-201ENST00000616145 209 ntBASIC2.33□□□□□ -2.04
CALD1Q05682 AP000560.1-201ENST00000624150 1937 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 RNA5SP276-201ENST00000362580 94 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 RNU6-82P-201ENST00000363970 107 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 Y_RNA.504-201ENST00000384481 104 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 MIR514A2-201ENST00000385131 88 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 MIR514A3-201ENST00000385132 88 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 RN7SKP61-201ENST00000410642 295 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 RNA5SP450-201ENST00000411206 102 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.32□□□□□ -2.04
CALD1Q05682 RPL23AP95-201ENST00000426806 265 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.32□□□□□ -2.04
CALD1Q05682 RPS29P11-201ENST00000496507 171 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 AC022447.4-201ENST00000504053 364 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 SNORA19.2-201ENST00000516013 114 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.32□□□□□ -2.04
CALD1Q05682 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.32□□□□□ -2.04
CALD1Q05682 MIR5692C1-201ENST00000585309 91 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.32□□□□□ -2.04
CALD1Q05682 AC084768.2-201ENST00000622736 221 ntBASIC2.32□□□□□ -2.04
CALD1Q05682 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CALD1Q05682 RNU6-483P-201ENST00000384088 108 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms