Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MIR5695-201ENST00000579717 85 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 AL138726.1-201ENST00000614873 333 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 AC022709.1-201ENST00000615967 87 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 AC099654.8-201ENST00000637757 681 ntBASIC0.08□□□□□ -2.4
HIST1H1AQ02539 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.07□□□□□ -2.4
HIST1H1AQ02539 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.07□□□□□ -2.4
HIST1H1AQ02539 EEF1E1P1-201ENST00000446998 430 ntBASIC0.07□□□□□ -2.4
HIST1H1AQ02539 PAXBP1P1-201ENST00000449315 447 ntBASIC0.07□□□□□ -2.4
HIST1H1AQ02539 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.07□□□□□ -2.4
HIST1H1AQ02539 RNU6-1041P-201ENST00000516254 102 ntBASIC0.07□□□□□ -2.4
HIST1H1AQ02539 RNU6-922P-201ENST00000516753 99 ntBASIC0.07□□□□□ -2.4
HIST1H1AQ02539 RNU6-856P-201ENST00000516959 98 ntBASIC0.07□□□□□ -2.4
HIST1H1AQ02539 MTCO3P15-201ENST00000526563 574 ntBASIC0.07□□□□□ -2.4
HIST1H1AQ02539 AC011979.2-201ENST00000527568 352 ntBASIC0.07□□□□□ -2.4
HIST1H1AQ02539 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.07□□□□□ -2.4
HIST1H1AQ02539 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.07□□□□□ -2.4
HIST1H1AQ02539 AC116165.2-201ENST00000616705 206 ntBASIC0.07□□□□□ -2.4
HIST1H1AQ02539 MIR924-201ENST00000638017 53 ntBASIC0.07□□□□□ -2.4
HIST1H1AQ02539 SNORD114-23-201ENST00000363536 72 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.06□□□□□ -2.4
HIST1H1AQ02539 MIR1295A-201ENST00000408463 79 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 RNU2-70P-201ENST00000410718 179 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 AL359704.1-201ENST00000411586 781 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.06□□□□□ -2.4
HIST1H1AQ02539 AL031313.1-201ENST00000448435 256 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 AL139824.2-201ENST00000458731 1095 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 SRRM1P2-201ENST00000464531 1192 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 AC010531.2-201ENST00000465012 153 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 HMGN1P12-201ENST00000499125 195 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 AC027338.1-201ENST00000514840 825 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 SNORA70.12-201ENST00000516084 153 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 Y_RNA.687-201ENST00000516558 91 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 MIR5708-201ENST00000579723 85 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 SNORA4-201ENST00000584302 138 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 AC174048.1-201ENST00000603389 144 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 AL445435.1-201ENST00000604232 665 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 AC023158.2-201ENST00000614876 543 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 MIR6515-201ENST00000619843 57 ntBASIC0.06□□□□□ -2.4
HIST1H1AQ02539 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.06□□□□□ -2.4
HIST1H1AQ02539 Y_RNA.116-201ENST00000363292 103 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 RNU6-289P-201ENST00000364093 107 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 RNU5A-8P-201ENST00000364102 114 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 Y_RNA.238-201ENST00000364441 102 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 Y_RNA.354-201ENST00000365448 111 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 RNU6-342P-201ENST00000384521 104 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 SNORD89-201ENST00000390981 114 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 RPL22P18-201ENST00000417197 377 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.05□□□□□ -2.4
HIST1H1AQ02539 AC060773.1-201ENST00000421698 310 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.05□□□□□ -2.4
HIST1H1AQ02539 MTCYBP39-201ENST00000437562 491 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 AC073614.1-201ENST00000438690 650 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 AC007969.2-201ENST00000441891 191 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 AC105313.1-201ENST00000509121 353 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 AC121161.1-201ENST00000510606 652 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 OR4H6P-202ENST00000603819 340 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 AC112191.3-201ENST00000604371 277 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 RPL21P136-201ENST00000605378 396 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 AC092354.1-201ENST00000606057 376 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 AC004808.1-201ENST00000627671 721 ntBASIC0.05□□□□□ -2.4
HIST1H1AQ02539 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
HIST1H1AQ02539 RNU6-142P-201ENST00000384019 107 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 RNU6-505P-201ENST00000384427 107 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 RPS3AP36-201ENST00000398190 775 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 MRPS36P1-201ENST00000421291 307 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 DAP3P1-201ENST00000441522 278 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 AL353718.1-201ENST00000451028 517 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 U7.7-201ENST00000459276 60 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 AL049830.1-201ENST00000468034 425 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.04□□□□□ -2.4
HIST1H1AQ02539 AC087854.1-201ENST00000519706 414 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 MIR15A-201ENST00000607334 83 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 AC124016.2-201ENST00000610058 665 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 MIR8084-201ENST00000614105 89 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 MTND4P5-201ENST00000435821 1374 ntBASIC0.04□□□□□ -2.4
HIST1H1AQ02539 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
HIST1H1AQ02539 SNORD116-13-201ENST00000384408 92 ntBASIC0.03□□□□□ -2.4
HIST1H1AQ02539 TIMM9P2-201ENST00000419324 266 ntBASIC0.03□□□□□ -2.4
HIST1H1AQ02539 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.03□□□□□ -2.4
HIST1H1AQ02539 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.03□□□□□ -2.4
HIST1H1AQ02539 NDUFA5P4-201ENST00000436704 385 ntBASIC0.03□□□□□ -2.4
HIST1H1AQ02539 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.03□□□□□ -2.4
HIST1H1AQ02539 AP000542.1-201ENST00000448473 371 ntBASIC0.03□□□□□ -2.4
HIST1H1AQ02539 AC093899.1-201ENST00000457984 376 ntBASIC0.03□□□□□ -2.4
HIST1H1AQ02539 MTND3P5-201ENST00000512798 333 ntBASIC0.03□□□□□ -2.4
HIST1H1AQ02539 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.03□□□□□ -2.4
HIST1H1AQ02539 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.03□□□□□ -2.4
HIST1H1AQ02539 MTND5P16-201ENST00000460269 1703 ntBASIC0.03□□□□□ -2.4
HIST1H1AQ02539 Y_RNA.122-201ENST00000363331 96 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 RNU6-1285P-201ENST00000363480 105 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 MIR518E-201ENST00000385252 88 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 RNU4-22P-201ENST00000411058 166 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 MTCO1P17-201ENST00000411522 491 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.02□□□□□ -2.41
HIST1H1AQ02539 C1DP2-201ENST00000418167 426 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 AL953862.1-201ENST00000423016 168 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 ZFAND6P1-201ENST00000434138 605 ntBASIC0.02□□□□□ -2.41
HIST1H1AQ02539 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.02□□□□□ -2.41
HIST1H1AQ02539 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms