Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 MIR544A-201ENST00000384855 91 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 RNU6-1304P-201ENST00000411374 106 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AP000275.1-201ENST00000411943 390 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.3□□□□□ -2.04
CDR2Q01850 MTND3P9-201ENST00000429526 346 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.3□□□□□ -2.04
CDR2Q01850 SNORD5.1-201ENST00000458800 75 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 RNU7-26P-201ENST00000458980 63 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 RPL30P12-201ENST00000474666 353 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 SNORA25.11-201ENST00000515935 105 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 RNU6-1016P-201ENST00000516689 94 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 RNU1-104P-201ENST00000517280 175 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AP005902.1-201ENST00000521358 186 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.3□□□□□ -2.04
CDR2Q01850 APOOP3-201ENST00000536787 586 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AC010186.2-204ENST00000537668 439 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AC079598.5-201ENST00000547460 117 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.3□□□□□ -2.04
CDR2Q01850 SNRPGP18-201ENST00000553000 214 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.3□□□□□ -2.04
CDR2Q01850 MIR4795-201ENST00000584182 89 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AC018462.2-201ENST00000605375 395 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AC124303.1-201ENST00000605703 360 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AL159153.1-201ENST00000619688 317 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AC024581.2-201ENST00000619986 252 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 AC098657.3-201ENST00000620434 263 ntBASIC2.3□□□□□ -2.04
CDR2Q01850 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.3□□□□□ -2.04
CDR2Q01850 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CDR2Q01850 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.3□□□□□ -2.04
CDR2Q01850 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.3□□□□□ -2.04
CDR2Q01850 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CDR2Q01850 SNORA67.1-201ENST00000364749 141 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 RNU6-43P-201ENST00000384302 107 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 SNORD116-29-201ENST00000384516 83 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 MT-TD-201ENST00000387419 68 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 RNU6-1106P-201ENST00000390845 107 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 AC007064.1-201ENST00000412238 351 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDR2Q01850 RPL23AP95-201ENST00000426806 265 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.29□□□□□ -2.04
CDR2Q01850 Y_RNA.635-201ENST00000459041 101 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 AC112771.1-201ENST00000463581 102 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 HMGB3P3-201ENST00000510526 400 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.29□□□□□ -2.04
CDR2Q01850 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.29□□□□□ -2.04
CDR2Q01850 Y_RNA.670-201ENST00000516255 105 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 RNU6-1213P-201ENST00000517075 94 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.29□□□□□ -2.04
CDR2Q01850 FRG2DP-202ENST00000566967 323 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 AC011494.1-201ENST00000596454 237 ntBASIC2.29□□□□□ -2.04
CDR2Q01850 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.29□□□□□ -2.04
CDR2Q01850 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.29□□□□□ -2.04
CDR2Q01850 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDR2Q01850 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.28□□□□□ -2.04
CDR2Q01850 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.28□□□□□ -2.04
CDR2Q01850 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.28□□□□□ -2.04
CDR2Q01850 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDR2Q01850 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
CDR2Q01850 RNU6-1010P-201ENST00000362757 107 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 Y_RNA.61-201ENST00000362835 102 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 RNU6-227P-201ENST00000362865 103 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 Y_RNA.67-201ENST00000362870 100 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 RNU6-1285P-201ENST00000363480 105 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 Y_RNA.404-201ENST00000383978 102 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 SNORA51.11-201ENST00000384442 131 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 RNU6-790P-201ENST00000384479 105 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 RNU6-601P-201ENST00000384540 107 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 MIR521-1-201ENST00000384902 87 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 Y_RNA.594-201ENST00000410373 140 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 Z82205.1-201ENST00000428456 297 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.28□□□□□ -2.04
CDR2Q01850 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.28□□□□□ -2.04
CDR2Q01850 Y_RNA.632-201ENST00000459189 102 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.28□□□□□ -2.04
CDR2Q01850 RPL36AP48-201ENST00000485521 314 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.28□□□□□ -2.04
CDR2Q01850 RNU6-559P-201ENST00000516151 98 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 RNU1-54P-201ENST00000517181 120 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.28□□□□□ -2.04
CDR2Q01850 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.28□□□□□ -2.04
CDR2Q01850 AC078795.3-201ENST00000602913 472 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 AP000654.2-201ENST00000605633 586 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 MIR8076-201ENST00000611401 83 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 HMGB1P24-202ENST00000615653 685 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 SCARNA15.3-201ENST00000626315 122 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 SCARNA4.1-201ENST00000628597 123 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 SNORA43.4-201ENST00000629559 138 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 AL450472.1-202ENST00000637286 180 ntBASIC2.28□□□□□ -2.04
CDR2Q01850 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.28□□□□□ -2.05
CDR2Q01850 AL359854.1-201ENST00000614203 1594 ntBASIC2.27□□□□□ -2.05
CDR2Q01850 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDR2Q01850 RNU4-82P-201ENST00000362443 140 ntBASIC2.27□□□□□ -2.05
CDR2Q01850 RNU4-79P-201ENST00000362764 141 ntBASIC2.27□□□□□ -2.05
CDR2Q01850 SNORD50.1-201ENST00000362987 71 ntBASIC2.27□□□□□ -2.05
CDR2Q01850 RNU6-797P-201ENST00000363101 109 ntBASIC2.27□□□□□ -2.05
CDR2Q01850 RNU1-91P-201ENST00000364746 163 ntBASIC2.27□□□□□ -2.05
CDR2Q01850 Y_RNA.387-201ENST00000383918 102 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms