Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
IRF9Q00978 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.32□□□□□ -1.88
IRF9Q00978 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
IRF9Q00978 ZNF204P-201ENST00000416749 2397 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 Y_RNA.14-201ENST00000362415 103 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 RNU6-655P-201ENST00000362858 107 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 SNORD56.3-201ENST00000363507 71 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 RNU5F-3P-201ENST00000363767 117 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 SNORA5A-201ENST00000384111 134 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 MIR215-201ENST00000384858 110 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 MIR329-1-201ENST00000385028 80 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 RNU6-1093P-201ENST00000391194 107 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 CBX3P9-201ENST00000402326 552 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 RNU6-1203P-201ENST00000410703 110 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 RNU6-847P-201ENST00000411115 108 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.31□□□□□ -1.88
IRF9Q00978 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.31□□□□□ -1.88
IRF9Q00978 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.31□□□□□ -1.88
IRF9Q00978 AC006445.1-201ENST00000491925 405 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.31□□□□□ -1.88
IRF9Q00978 RNU1-143P-201ENST00000516296 146 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 IGKV2-26-201ENST00000518305 343 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.31□□□□□ -1.88
IRF9Q00978 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.31□□□□□ -1.88
IRF9Q00978 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.31□□□□□ -1.88
IRF9Q00978 MIR4444-1-201ENST00000581696 74 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 MIR4444-2-201ENST00000584390 74 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 AL356575.1-201ENST00000603008 283 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 AL162713.1-201ENST00000604480 262 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 U1.23-201ENST00000610293 146 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 RNU1-68P-201ENST00000615382 146 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 XIST_intron.1-201ENST00000619444 68 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 U1.39-201ENST00000621562 146 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.31□□□□□ -1.88
IRF9Q00978 AL356274.2-201ENST00000624379 3752 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 AC091152.2-201ENST00000591628 2569 ntBASIC3.31□□□□□ -1.88
IRF9Q00978 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
IRF9Q00978 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
IRF9Q00978 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
IRF9Q00978 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.31□□□□□ -1.88
IRF9Q00978 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
IRF9Q00978 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IRF9Q00978 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IRF9Q00978 BX322639.1-202ENST00000423987 2213 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IRF9Q00978 snoU2_19.2-201ENST00000363024 80 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 RNU6-1210P-201ENST00000363775 107 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 SNORA73.2-201ENST00000364946 201 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
IRF9Q00978 RNU6-1145P-201ENST00000384246 107 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 RNU6-937P-201ENST00000384325 106 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 Y_RNA.562-201ENST00000384695 113 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.3□□□□□ -1.88
IRF9Q00978 RNU2-20P-201ENST00000410425 191 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.3□□□□□ -1.88
IRF9Q00978 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.3□□□□□ -1.88
IRF9Q00978 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.3□□□□□ -1.88
IRF9Q00978 RPL39P38-201ENST00000467018 153 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 AL121594.1-201ENST00000475906 575 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 AC093663.1-201ENST00000497190 394 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.3□□□□□ -1.88
IRF9Q00978 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.3□□□□□ -1.88
IRF9Q00978 AC008739.3-201ENST00000603262 127 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 AC110079.1-202ENST00000635213 138 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 AL034408.1-202ENST00000636088 415 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 U6.98-201ENST00000637157 84 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 AL021368.2-201ENST00000606125 5352 ntBASIC3.3□□□□□ -1.88
IRF9Q00978 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
IRF9Q00978 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
IRF9Q00978 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.3□□□□□ -1.88
IRF9Q00978 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IRF9Q00978 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.3□□□□□ -1.88
IRF9Q00978 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
IRF9Q00978 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
IRF9Q00978 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
IRF9Q00978 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
IRF9Q00978 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.29□□□□□ -1.88
IRF9Q00978 AL079305.1-201ENST00000623159 3008 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
IRF9Q00978 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.29□□□□□ -1.88
IRF9Q00978 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.29□□□□□ -1.88
IRF9Q00978 RNU6-799P-201ENST00000363567 107 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 RNA5SP201-201ENST00000410316 124 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.29□□□□□ -1.88
IRF9Q00978 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.29□□□□□ -1.88
IRF9Q00978 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
IRF9Q00978 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.29□□□□□ -1.88
IRF9Q00978 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.29□□□□□ -1.88
IRF9Q00978 RPL23AP70-201ENST00000483361 460 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.29□□□□□ -1.88
IRF9Q00978 SNORA31.6-201ENST00000516241 130 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 Y_RNA.680-201ENST00000516441 93 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 SNORA25.14-201ENST00000516481 132 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 RNU6-388P-201ENST00000517012 105 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 RNU6-389P-201ENST00000517048 105 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.29□□□□□ -1.88
IRF9Q00978 SNORA51-201ENST00000606420 132 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 AC010999.1-201ENST00000611856 324 ntBASIC3.29□□□□□ -1.88
IRF9Q00978 AP001282.2-201ENST00000616149 309 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms