Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL590556.1-201ENST00000423231 483 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 Z82205.1-201ENST00000428456 297 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 AC104564.1-201ENST00000493028 407 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 PTP4A1P4-201ENST00000512479 322 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.29□□□□□ -2.04
CDK3Q00526 Y_RNA.682-201ENST00000516457 100 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 SNORA48.11-201ENST00000517015 89 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.29□□□□□ -2.04
CDK3Q00526 AC007336.1-201ENST00000576365 3828 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 MIR4790-201ENST00000577799 79 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 MIR4801-201ENST00000582704 82 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.29□□□□□ -2.04
CDK3Q00526 AC078795.3-201ENST00000602913 472 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 AC018889.1-201ENST00000605372 397 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 AL022345.1-201ENST00000607292 135 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 AC019193.3-201ENST00000609144 554 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 AC063943.3-201ENST00000615562 356 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 DUXAP9-208ENST00000622815 614 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 AL133216.2-202ENST00000634512 349 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 ZNF658B-202ENST00000615961 3375 ntBASIC2.29□□□□□ -2.04
CDK3Q00526 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CDK3Q00526 RNU1-23P-201ENST00000363361 144 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 U8.8-201ENST00000365399 135 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.28□□□□□ -2.04
CDK3Q00526 RNU6-142P-201ENST00000384019 107 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 SNORA36A-201ENST00000384221 132 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 RNU6-306P-201ENST00000384617 107 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CDK3Q00526 SNORA26.3-201ENST00000391119 136 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 AC007064.1-201ENST00000412238 351 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.28□□□□□ -2.04
CDK3Q00526 AL135786.1-201ENST00000415892 214 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 Z98742.3-201ENST00000418637 326 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.28□□□□□ -2.04
CDK3Q00526 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.28□□□□□ -2.04
CDK3Q00526 AL356320.1-201ENST00000429616 163 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.28□□□□□ -2.04
CDK3Q00526 RPS15AP28-201ENST00000435088 386 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 MTND1P17-201ENST00000448961 204 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDK3Q00526 PMCHL2-203ENST00000457791 237 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 ANXA2P1-201ENST00000505539 926 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.28□□□□□ -2.04
CDK3Q00526 AL117351.2-201ENST00000513571 157 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 AC046134.1-201ENST00000514454 666 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.28□□□□□ -2.04
CDK3Q00526 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.28□□□□□ -2.04
CDK3Q00526 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.28□□□□□ -2.04
CDK3Q00526 MIR3945-201ENST00000581853 98 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.28□□□□□ -2.04
CDK3Q00526 AL161423.1-201ENST00000613700 262 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 AC010297.1-201ENST00000623948 149 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 AL450472.1-202ENST00000637286 180 ntBASIC2.28□□□□□ -2.04
CDK3Q00526 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.28□□□□□ -2.04
CDK3Q00526 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDK3Q00526 RNU6-845P-201ENST00000362578 103 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 RNU4-15P-201ENST00000362613 141 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 RNU6-944P-201ENST00000364023 107 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 SNORA25.6-201ENST00000364121 118 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 MIR561-201ENST00000385216 97 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.27□□□□□ -2.05
CDK3Q00526 EIF1AXP1-201ENST00000419267 435 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 AL353572.1-201ENST00000442490 417 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 AC145146.1-201ENST00000496370 254 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 RPS27P27-201ENST00000498779 255 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.27□□□□□ -2.05
CDK3Q00526 AC116353.2-201ENST00000505332 712 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.27□□□□□ -2.05
CDK3Q00526 RNU7-30P-201ENST00000516835 62 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.27□□□□□ -2.05
CDK3Q00526 AC021231.3-201ENST00000558497 370 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 AC005668.1-201ENST00000571142 476 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 POLR3GP2-201ENST00000588366 668 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.27□□□□□ -2.05
CDK3Q00526 AL078605.1-201ENST00000603529 500 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 AC124303.1-201ENST00000605703 360 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 U4atac.1-201ENST00000618345 95 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
CDK3Q00526 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CDK3Q00526 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CDK3Q00526 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.27□□□□□ -2.05
CDK3Q00526 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDK3Q00526 ZNF271P-202ENST00000465539 1970 ntBASIC2.27□□□□□ -2.05
CDK3Q00526 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
CDK3Q00526 MTND5P6-201ENST00000422338 1798 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDK3Q00526 RNU1-91P-201ENST00000364746 163 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 SNORA70B-201ENST00000384210 135 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
CDK3Q00526 RN7SKP32-201ENST00000410167 303 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 RNA5SP425-201ENST00000410336 112 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 Y_RNA.597-201ENST00000410463 100 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 AC138393.2-201ENST00000414742 246 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 AC018634.1-201ENST00000437554 401 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.26□□□□□ -2.05
CDK3Q00526 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.26□□□□□ -2.05
CDK3Q00526 DAP3P1-201ENST00000441522 278 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 AC009238.1-201ENST00000442165 424 ntBASIC2.26□□□□□ -2.05
CDK3Q00526 AC009237.6-201ENST00000446969 424 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms