Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.19□□□□□ -2.06
CX3CL1P78423 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.19□□□□□ -2.06
CX3CL1P78423 AL158827.2-201ENST00000602494 330 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 AL355297.2-201ENST00000604792 129 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 LARP7P1-201ENST00000605576 316 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.19□□□□□ -2.06
CX3CL1P78423 AL691447.3-201ENST00000635020 330 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 AC112487.2-201ENST00000637950 304 ntBASIC2.19□□□□□ -2.06
CX3CL1P78423 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CX3CL1P78423 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
CX3CL1P78423 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.19□□□□□ -2.06
CX3CL1P78423 Y_RNA.356-201ENST00000365475 113 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 Y_RNA.533-201ENST00000384596 114 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CX3CL1P78423 AL138827.1-201ENST00000402666 306 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 MTCYBP2-201ENST00000407745 171 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 Y_RNA.604-201ENST00000410574 102 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 RNA5SP494-201ENST00000410653 129 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 AL358453.1-201ENST00000422522 250 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 AL590556.1-201ENST00000423231 483 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 AC012306.1-201ENST00000423267 114 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 AC112220.1-201ENST00000434628 355 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.18□□□□□ -2.06
CX3CL1P78423 SNRPEP8-201ENST00000442866 260 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 AL353705.4-201ENST00000449661 238 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 RNU6-559P-201ENST00000516151 98 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 RNU6-1213P-201ENST00000517075 94 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.18□□□□□ -2.06
CX3CL1P78423 MIR3923-201ENST00000579521 83 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 MIR4273-201ENST00000582824 84 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 AC010297.1-201ENST00000623948 149 ntBASIC2.18□□□□□ -2.06
CX3CL1P78423 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.18□□□□□ -2.06
CX3CL1P78423 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CX3CL1P78423 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CX3CL1P78423 DEFA7P-201ENST00000382676 285 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 Y_RNA.404-201ENST00000383978 102 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 SNORA12-201ENST00000391162 147 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 SNORA75.4-201ENST00000391278 119 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 Y_RNA.597-201ENST00000410463 100 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 RNU6-1304P-201ENST00000411374 106 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 AC096664.2-201ENST00000411843 406 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.17□□□□□ -2.06
CX3CL1P78423 AC243428.1-201ENST00000421099 264 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 AC107083.1-201ENST00000439643 279 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 AC087477.1-201ENST00000465747 340 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 APOOP3-201ENST00000536787 586 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 AL355375.2-201ENST00000574825 175 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 MIR5696-201ENST00000578474 85 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 SCARNA4-201ENST00000629045 128 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 AL669831.3-213ENST00000636676 183 ntBASIC2.17□□□□□ -2.06
CX3CL1P78423 AL365361.1-201ENST00000566942 3481 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CX3CL1P78423 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.16□□□□□ -2.06
CX3CL1P78423 Y_RNA.2-201ENST00000362330 96 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 RNU6-1188P-201ENST00000363795 107 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 RNU6-378P-201ENST00000384324 107 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 MIR208B-201ENST00000401172 77 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 RNU2-41P-201ENST00000410991 178 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 Z92545.1-201ENST00000411782 234 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 COTL1P1-201ENST00000422309 375 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.16□□□□□ -2.06
CX3CL1P78423 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.16□□□□□ -2.06
CX3CL1P78423 RPL23AP75-201ENST00000491601 451 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 RNA5SP384-201ENST00000516615 116 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 SNORA31.15-201ENST00000516771 132 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CX3CL1P78423 CBX3P8-201ENST00000532412 525 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 AC018630.3-201ENST00000542637 96 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 RAB11AP2-201ENST00000545905 639 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 AC093027.1-201ENST00000546698 429 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 FRG2DP-202ENST00000566967 323 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 PCGEM1.1-201ENST00000613431 131 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 AC005520.5-201ENST00000613926 164 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 PISRT1.1-201ENST00000616930 107 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 U4atac.1-201ENST00000618345 95 ntBASIC2.16□□□□□ -2.06
CX3CL1P78423 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CX3CL1P78423 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CX3CL1P78423 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.15□□□□□ -2.06
CX3CL1P78423 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CX3CL1P78423 ZNF299P-201ENST00000406845 1804 ntBASIC2.15□□□□□ -2.06
CX3CL1P78423 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CX3CL1P78423 MIR6073-201ENST00000352083 89 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 Y_RNA.48-201ENST00000362710 103 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 SNORD32B-201ENST00000364460 84 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 Y_RNA.387-201ENST00000383918 102 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 RNU6-1297P-201ENST00000384415 104 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CX3CL1P78423 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CX3CL1P78423 RNA5SP21-201ENST00000410917 96 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 USMG5P1-201ENST00000425964 177 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.15□□□□□ -2.07
CX3CL1P78423 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.15□□□□□ -2.07
CX3CL1P78423 Z82188.1-201ENST00000436709 154 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.15□□□□□ -2.07
CX3CL1P78423 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.15□□□□□ -2.07
CX3CL1P78423 AC018868.1-201ENST00000491307 315 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.15□□□□□ -2.07
CX3CL1P78423 MTND3P22-201ENST00000510932 243 ntBASIC2.15□□□□□ -2.07
CX3CL1P78423 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 147.8 ms