Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC091435.1-201ENST00000505442 584 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.26□□□□□ -2.37
ABCA4P78363 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.26□□□□□ -2.37
ABCA4P78363 ACA64.5-201ENST00000516207 127 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 AL590705.4-201ENST00000532209 134 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
ABCA4P78363 AL365204.3-201ENST00000612448 685 ntBASIC0.26□□□□□ -2.37
ABCA4P78363 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.25□□□□□ -2.37
ABCA4P78363 SNORA63D-201ENST00000364359 132 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 RNU6-110P-201ENST00000384508 104 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 MIR942-201ENST00000401111 86 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 AC068533.2-201ENST00000411872 306 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.25□□□□□ -2.37
ABCA4P78363 AC060773.1-201ENST00000421698 310 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 AC063976.4-201ENST00000421971 163 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 MTCO3P29-201ENST00000432119 779 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.25□□□□□ -2.37
ABCA4P78363 AC006026.2-201ENST00000457376 180 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 MTND1P3-201ENST00000484956 952 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 SNORA31.2-201ENST00000516019 134 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.25□□□□□ -2.37
ABCA4P78363 AC021451.1-201ENST00000523498 1129 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 AP001893.2-201ENST00000526949 202 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 AP001180.6-201ENST00000584918 159 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.25□□□□□ -2.37
ABCA4P78363 AL353778.1-201ENST00000603149 408 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 AC104465.1-201ENST00000611365 139 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 AC130324.3-201ENST00000614165 542 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.25□□□□□ -2.37
ABCA4P78363 AL159153.1-201ENST00000619688 317 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 SNORD18A-201ENST00000363753 72 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 RNU4-12P-201ENST00000365233 139 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
ABCA4P78363 RNU6-1237P-201ENST00000384777 107 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
ABCA4P78363 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.25□□□□□ -2.37
ABCA4P78363 AL162395.1-201ENST00000457882 422 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.25□□□□□ -2.37
ABCA4P78363 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.25□□□□□ -2.37
ABCA4P78363 AC010468.3-201ENST00000508225 458 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 SUMO2P18-201ENST00000518873 252 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 MIR4293-201ENST00000584305 78 ntBASIC0.25□□□□□ -2.37
ABCA4P78363 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
ABCA4P78363 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.24□□□□□ -2.37
ABCA4P78363 MIR412-201ENST00000362142 91 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 RNY4P24-201ENST00000362735 96 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 RNU6-468P-201ENST00000384003 109 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 SNORD99-201ENST00000408612 74 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.24□□□□□ -2.37
ABCA4P78363 SEPT14P24-201ENST00000447236 180 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 RPS27AP8-201ENST00000452665 445 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.24□□□□□ -2.37
ABCA4P78363 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.24□□□□□ -2.37
ABCA4P78363 OR4H6P-202ENST00000603819 340 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 DPPA3P3-201ENST00000603842 430 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 AC092656.1-203ENST00000624134 423 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 AC092268.1-201ENST00000342691 405 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 RNU5B-1-201ENST00000363286 116 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 RNU4-56P-201ENST00000364700 142 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.24□□□□□ -2.37
ABCA4P78363 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.24□□□□□ -2.37
ABCA4P78363 RSL24D1P8-201ENST00000434442 492 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.24□□□□□ -2.37
ABCA4P78363 AC109445.1-201ENST00000512356 383 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.24□□□□□ -2.37
ABCA4P78363 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.24□□□□□ -2.37
ABCA4P78363 AC122134.1-202ENST00000569111 1201 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 AC024060.1-201ENST00000607052 494 ntBASIC0.24□□□□□ -2.37
ABCA4P78363 AL391994.1-201ENST00000254724 282 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 SNORD3E-201ENST00000362899 217 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 RNU6-743P-201ENST00000364151 106 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 RNU6-817P-201ENST00000391083 104 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 RNU6-1025P-201ENST00000410629 104 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 RNU2-62P-201ENST00000410868 191 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 RNU6-575P-201ENST00000411326 105 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.23□□□□□ -2.37
ABCA4P78363 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.23□□□□□ -2.37
ABCA4P78363 AC092325.1-201ENST00000566449 554 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.23□□□□□ -2.37
ABCA4P78363 AC105148.1-201ENST00000604961 409 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 AC104985.3-201ENST00000623479 597 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 SNORD3E-202ENST00000627253 216 ntBASIC0.23□□□□□ -2.37
ABCA4P78363 Y_RNA.33-201ENST00000362591 102 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 RNU6-289P-201ENST00000364093 107 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 RNU6-1126P-201ENST00000384002 107 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 MIR604-201ENST00000384880 94 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 MIR548B-201ENST00000385247 97 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AC048334.1-201ENST00000477975 159 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AC104629.1-201ENST00000494226 508 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 HMGB1P28-201ENST00000507778 552 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 RNU6-583P-201ENST00000516012 92 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 RNA5SP216-201ENST00000516111 123 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 RNU6-197P-201ENST00000516680 100 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 MTCYBP33-201ENST00000575007 1130 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 MIR4493-201ENST00000584016 73 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AC091135.1-201ENST00000585943 307 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AL445435.1-201ENST00000604232 665 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 AP001596.2-201ENST00000608410 312 ntBASIC0.22□□□□□ -2.37
ABCA4P78363 GHRLOS.1-201ENST00000610995 70 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms