Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 RPL26P26-201ENST00000480251 434 ntBASIC3.78□□□□□ -1.8
RTP1P59025 SNORD116-28-201ENST00000516123 91 ntBASIC3.78□□□□□ -1.8
RTP1P59025 RNU6-861P-201ENST00000516745 106 ntBASIC3.78□□□□□ -1.8
RTP1P59025 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.78□□□□□ -1.8
RTP1P59025 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.78□□□□□ -1.8
RTP1P59025 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.78□□□□□ -1.8
RTP1P59025 MIR4423-201ENST00000580922 80 ntBASIC3.78□□□□□ -1.8
RTP1P59025 Z83818.1-201ENST00000603584 150 ntBASIC3.78□□□□□ -1.8
RTP1P59025 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.78□□□□□ -1.8
RTP1P59025 SNORA43.4-201ENST00000629559 138 ntBASIC3.78□□□□□ -1.8
RTP1P59025 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RTP1P59025 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTP1P59025 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
RTP1P59025 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.77□□□□□ -1.81
RTP1P59025 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RTP1P59025 RNU5B-2P-201ENST00000363036 113 ntBASIC3.77□□□□□ -1.81
RTP1P59025 Y_RNA.292-201ENST00000364904 97 ntBASIC3.77□□□□□ -1.81
RTP1P59025 RNU1-140P-201ENST00000365040 165 ntBASIC3.77□□□□□ -1.81
RTP1P59025 RNU6-47P-201ENST00000383866 107 ntBASIC3.77□□□□□ -1.81
RTP1P59025 RNU6-217P-201ENST00000384164 104 ntBASIC3.77□□□□□ -1.81
RTP1P59025 Y_RNA.569-201ENST00000384749 103 ntBASIC3.77□□□□□ -1.81
RTP1P59025 MIR607-201ENST00000385241 96 ntBASIC3.77□□□□□ -1.81
RTP1P59025 MIR493-201ENST00000385254 89 ntBASIC3.77□□□□□ -1.81
RTP1P59025 RNU2-37P-201ENST00000410695 177 ntBASIC3.77□□□□□ -1.81
RTP1P59025 RNU6-651P-201ENST00000411040 105 ntBASIC3.77□□□□□ -1.81
RTP1P59025 RNU5A-5P-201ENST00000411054 116 ntBASIC3.77□□□□□ -1.81
RTP1P59025 AL512844.2-201ENST00000433990 593 ntBASIC3.77□□□□□ -1.81
RTP1P59025 AC073901.1-201ENST00000462471 408 ntBASIC3.77□□□□□ -1.81
RTP1P59025 COX6CP14-201ENST00000469580 174 ntBASIC3.77□□□□□ -1.81
RTP1P59025 AC074198.2-201ENST00000508153 258 ntBASIC3.77□□□□□ -1.81
RTP1P59025 RNU2-58P-201ENST00000516403 183 ntBASIC3.77□□□□□ -1.81
RTP1P59025 RN7SKP49-201ENST00000516675 260 ntBASIC3.77□□□□□ -1.81
RTP1P59025 AK6P2-201ENST00000549020 471 ntBASIC3.77□□□□□ -1.81
RTP1P59025 AC027288.2-201ENST00000553028 243 ntBASIC3.77□□□□□ -1.81
RTP1P59025 AL162424.1-201ENST00000602325 221 ntBASIC3.77□□□□□ -1.81
RTP1P59025 RPL12P50-201ENST00000603116 116 ntBASIC3.77□□□□□ -1.81
RTP1P59025 AL162713.1-201ENST00000604480 262 ntBASIC3.77□□□□□ -1.81
RTP1P59025 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.77□□□□□ -1.81
RTP1P59025 AL137790.1-201ENST00000634283 177 ntBASIC3.77□□□□□ -1.81
RTP1P59025 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
RTP1P59025 AC090740.1-201ENST00000623193 2262 ntBASIC3.76□□□□□ -1.81
RTP1P59025 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.76□□□□□ -1.81
RTP1P59025 Y_RNA.122-201ENST00000363331 96 ntBASIC3.76□□□□□ -1.81
RTP1P59025 SNORD116-20-201ENST00000384529 92 ntBASIC3.76□□□□□ -1.81
RTP1P59025 MIR10B-201ENST00000385011 110 ntBASIC3.76□□□□□ -1.81
RTP1P59025 RNU6-1245P-201ENST00000411130 106 ntBASIC3.76□□□□□ -1.81
RTP1P59025 RPL21P66-201ENST00000426566 466 ntBASIC3.76□□□□□ -1.81
RTP1P59025 RPL23AP95-201ENST00000426806 265 ntBASIC3.76□□□□□ -1.81
RTP1P59025 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.76□□□□□ -1.81
RTP1P59025 RPL23AP67-201ENST00000465341 474 ntBASIC3.76□□□□□ -1.81
RTP1P59025 RPL7P47-201ENST00000497299 556 ntBASIC3.76□□□□□ -1.81
RTP1P59025 SNORA70.14-201ENST00000516205 110 ntBASIC3.76□□□□□ -1.81
RTP1P59025 AC022559.1-201ENST00000520905 205 ntBASIC3.76□□□□□ -1.81
RTP1P59025 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.76□□□□□ -1.81
RTP1P59025 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.76□□□□□ -1.81
RTP1P59025 UBL5P4-201ENST00000562584 236 ntBASIC3.76□□□□□ -1.81
RTP1P59025 AC011921.3-201ENST00000605540 361 ntBASIC3.76□□□□□ -1.81
RTP1P59025 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.76□□□□□ -1.81
RTP1P59025 AC005296.1-201ENST00000616145 209 ntBASIC3.76□□□□□ -1.81
RTP1P59025 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
RTP1P59025 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.76□□□□□ -1.81
RTP1P59025 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.76□□□□□ -1.81
RTP1P59025 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RTP1P59025 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.76□□□□□ -1.81
RTP1P59025 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTP1P59025 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTP1P59025 SRP72P2-201ENST00000344851 1979 ntBASIC3.75□□□□□ -1.81
RTP1P59025 RNU6-1159P-201ENST00000362933 107 ntBASIC3.75□□□□□ -1.81
RTP1P59025 RNU1-73P-201ENST00000383971 164 ntBASIC3.75□□□□□ -1.81
RTP1P59025 RNU6-281P-201ENST00000384212 103 ntBASIC3.75□□□□□ -1.81
RTP1P59025 U8.10-201ENST00000384260 133 ntBASIC3.75□□□□□ -1.81
RTP1P59025 RNU6-541P-201ENST00000384709 110 ntBASIC3.75□□□□□ -1.81
RTP1P59025 MIR487A-201ENST00000385009 80 ntBASIC3.75□□□□□ -1.81
RTP1P59025 WARS2P1-201ENST00000429678 537 ntBASIC3.75□□□□□ -1.81
RTP1P59025 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.75□□□□□ -1.81
RTP1P59025 AC107083.1-201ENST00000439643 279 ntBASIC3.75□□□□□ -1.81
RTP1P59025 AC007969.2-201ENST00000441891 191 ntBASIC3.75□□□□□ -1.81
RTP1P59025 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.75□□□□□ -1.81
RTP1P59025 AC021205.2-201ENST00000480069 347 ntBASIC3.75□□□□□ -1.81
RTP1P59025 RPL30P5-201ENST00000494923 336 ntBASIC3.75□□□□□ -1.81
RTP1P59025 RNU7-110P-201ENST00000516891 62 ntBASIC3.75□□□□□ -1.81
RTP1P59025 MIR5695-201ENST00000579717 85 ntBASIC3.75□□□□□ -1.81
RTP1P59025 AC093732.2-201ENST00000607950 274 ntBASIC3.75□□□□□ -1.81
RTP1P59025 AC024581.2-201ENST00000619986 252 ntBASIC3.75□□□□□ -1.81
RTP1P59025 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
RTP1P59025 AC017071.1-201ENST00000564407 2204 ntBASIC3.75□□□□□ -1.81
RTP1P59025 AL513302.2-201ENST00000562313 1842 ntBASIC3.74□□□□□ -1.81
RTP1P59025 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.74□□□□□ -1.81
RTP1P59025 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.74□□□□□ -1.81
RTP1P59025 SNORD56.1-201ENST00000362913 68 ntBASIC3.74□□□□□ -1.81
RTP1P59025 RNU6-626P-201ENST00000363354 107 ntBASIC3.74□□□□□ -1.81
RTP1P59025 Y_RNA.319-201ENST00000365138 92 ntBASIC3.74□□□□□ -1.81
RTP1P59025 HSPE1P26-201ENST00000405341 275 ntBASIC3.74□□□□□ -1.81
RTP1P59025 MIR548I2-201ENST00000408348 149 ntBASIC3.74□□□□□ -1.81
RTP1P59025 RNU6-1001P-201ENST00000411265 100 ntBASIC3.74□□□□□ -1.81
RTP1P59025 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.74□□□□□ -1.81
RTP1P59025 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.74□□□□□ -1.81
RTP1P59025 NDUFB4P6-201ENST00000436819 366 ntBASIC3.74□□□□□ -1.81
RTP1P59025 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
RTP1P59025 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms