Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC010099.3-201ENST00000423896 409 ntBASIC0.51□□□□□ -2.33
NUP98P52948 AL122001.1-201ENST00000457027 370 ntBASIC0.51□□□□□ -2.33
NUP98P52948 Y_RNA.687-201ENST00000516558 91 ntBASIC0.51□□□□□ -2.33
NUP98P52948 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.51□□□□□ -2.33
NUP98P52948 MTND3P13-201ENST00000574391 343 ntBASIC0.51□□□□□ -2.33
NUP98P52948 7SK.7-201ENST00000603504 247 ntBASIC0.51□□□□□ -2.33
NUP98P52948 AC099785.1-201ENST00000605697 437 ntBASIC0.51□□□□□ -2.33
NUP98P52948 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.51□□□□□ -2.33
NUP98P52948 AL356596.1-201ENST00000624230 379 ntBASIC0.51□□□□□ -2.33
NUP98P52948 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
NUP98P52948 MIR200A-201ENST00000384875 90 ntBASIC0.5□□□□□ -2.33
NUP98P52948 RPS3AP36-201ENST00000398190 775 ntBASIC0.5□□□□□ -2.33
NUP98P52948 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC0.5□□□□□ -2.33
NUP98P52948 MTND4P20-201ENST00000424125 869 ntBASIC0.5□□□□□ -2.33
NUP98P52948 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.5□□□□□ -2.33
NUP98P52948 AC113347.3-201ENST00000509113 148 ntBASIC0.5□□□□□ -2.33
NUP98P52948 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
NUP98P52948 SNORA43.2-201ENST00000516652 128 ntBASIC0.5□□□□□ -2.33
NUP98P52948 AL590229.1-201ENST00000603497 542 ntBASIC0.5□□□□□ -2.33
NUP98P52948 RNU6-527P-201ENST00000363425 104 ntBASIC0.5□□□□□ -2.33
NUP98P52948 RNU6-960P-201ENST00000364056 120 ntBASIC0.5□□□□□ -2.33
NUP98P52948 RNU4-56P-201ENST00000364700 142 ntBASIC0.5□□□□□ -2.33
NUP98P52948 SNORD114-24-201ENST00000365029 72 ntBASIC0.5□□□□□ -2.33
NUP98P52948 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.5□□□□□ -2.33
NUP98P52948 AL591043.1-201ENST00000432461 424 ntBASIC0.5□□□□□ -2.33
NUP98P52948 AC073910.1-201ENST00000445047 438 ntBASIC0.5□□□□□ -2.33
NUP98P52948 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.5□□□□□ -2.33
NUP98P52948 AC006026.2-201ENST00000457376 180 ntBASIC0.5□□□□□ -2.33
NUP98P52948 HAR1A.1-201ENST00000459583 118 ntBASIC0.5□□□□□ -2.33
NUP98P52948 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.5□□□□□ -2.33
NUP98P52948 MTND3P5-201ENST00000512798 333 ntBASIC0.5□□□□□ -2.33
NUP98P52948 AC090142.3-201ENST00000519012 385 ntBASIC0.5□□□□□ -2.33
NUP98P52948 MTCYBP33-201ENST00000575007 1130 ntBASIC0.5□□□□□ -2.33
NUP98P52948 AC023932.2-201ENST00000603176 175 ntBASIC0.5□□□□□ -2.33
NUP98P52948 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
NUP98P52948 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.5□□□□□ -2.33
NUP98P52948 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
NUP98P52948 RNU6-910P-201ENST00000390844 107 ntBASIC0.49□□□□□ -2.33
NUP98P52948 Y_RNA.578-201ENST00000390903 88 ntBASIC0.49□□□□□ -2.33
NUP98P52948 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.49□□□□□ -2.33
NUP98P52948 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.49□□□□□ -2.33
NUP98P52948 AC145146.1-201ENST00000496370 254 ntBASIC0.49□□□□□ -2.33
NUP98P52948 RNA5SP395-201ENST00000516567 118 ntBASIC0.49□□□□□ -2.33
NUP98P52948 AC087894.1-201ENST00000538359 518 ntBASIC0.49□□□□□ -2.33
NUP98P52948 MIR3146-201ENST00000580367 79 ntBASIC0.49□□□□□ -2.33
NUP98P52948 RNA5SP127-201ENST00000411051 133 ntBASIC0.48□□□□□ -2.33
NUP98P52948 RNU2-64P-201ENST00000411315 191 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AC114482.1-201ENST00000418010 247 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.48□□□□□ -2.33
NUP98P52948 MTCO3P29-201ENST00000432119 779 ntBASIC0.48□□□□□ -2.33
NUP98P52948 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.48□□□□□ -2.33
NUP98P52948 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.48□□□□□ -2.33
NUP98P52948 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.48□□□□□ -2.33
NUP98P52948 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.48□□□□□ -2.33
NUP98P52948 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.48□□□□□ -2.33
NUP98P52948 RAP1BP2-201ENST00000478270 544 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AC119751.4-201ENST00000507498 357 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.48□□□□□ -2.33
NUP98P52948 ADI1P3-201ENST00000549509 470 ntBASIC0.48□□□□□ -2.33
NUP98P52948 MTND4LP25-201ENST00000570218 163 ntBASIC0.48□□□□□ -2.33
NUP98P52948 MIR3136-201ENST00000583498 78 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AC006927.4-201ENST00000639187 543 ntBASIC0.48□□□□□ -2.33
NUP98P52948 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.48□□□□□ -2.33
NUP98P52948 RNU5E-7P-201ENST00000365290 117 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AL356776.1-201ENST00000406574 447 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AC006461.1-201ENST00000412637 326 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AC007969.2-201ENST00000441891 191 ntBASIC0.48□□□□□ -2.33
NUP98P52948 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AC109445.1-201ENST00000512356 383 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AC112206.3-201ENST00000514578 389 ntBASIC0.48□□□□□ -2.33
NUP98P52948 SNORA62.5-201ENST00000516634 120 ntBASIC0.48□□□□□ -2.33
NUP98P52948 RNU6-165P-201ENST00000517170 99 ntBASIC0.48□□□□□ -2.33
NUP98P52948 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.48□□□□□ -2.33
NUP98P52948 AC115990.1-201ENST00000526957 301 ntBASIC0.48□□□□□ -2.33
NUP98P52948 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.48□□□□□ -2.33
NUP98P52948 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.48□□□□□ -2.33
NUP98P52948 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.48□□□□□ -2.33
NUP98P52948 AC106800.4-201ENST00000614905 153 ntBASIC0.48□□□□□ -2.33
NUP98P52948 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
NUP98P52948 RNU6-1245P-201ENST00000411130 106 ntBASIC0.47□□□□□ -2.33
NUP98P52948 RNU6-293P-201ENST00000411259 106 ntBASIC0.47□□□□□ -2.33
NUP98P52948 RPS23P5-201ENST00000495419 428 ntBASIC0.47□□□□□ -2.33
NUP98P52948 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.47□□□□□ -2.33
NUP98P52948 AC068620.3-201ENST00000602749 560 ntBASIC0.47□□□□□ -2.33
NUP98P52948 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
NUP98P52948 AC245297.2-201ENST00000610119 565 ntBASIC0.47□□□□□ -2.33
NUP98P52948 AC008147.4-201ENST00000617570 1204 ntBASIC0.47□□□□□ -2.33
NUP98P52948 Z69720.2-201ENST00000624755 279 ntBASIC0.47□□□□□ -2.33
NUP98P52948 AC073343.1-201ENST00000328239 651 ntBASIC0.46□□□□□ -2.34
NUP98P52948 RNU4-15P-201ENST00000362613 141 ntBASIC0.46□□□□□ -2.34
NUP98P52948 RNU1-96P-201ENST00000364163 162 ntBASIC0.46□□□□□ -2.34
NUP98P52948 MIR10A-201ENST00000385043 110 ntBASIC0.46□□□□□ -2.34
NUP98P52948 AL117342.1-201ENST00000404861 406 ntBASIC0.46□□□□□ -2.34
NUP98P52948 AL008629.1-201ENST00000438615 184 ntBASIC0.46□□□□□ -2.34
NUP98P52948 AC007327.1-201ENST00000447461 264 ntBASIC0.46□□□□□ -2.34
NUP98P52948 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.46□□□□□ -2.34
NUP98P52948 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.46□□□□□ -2.34
NUP98P52948 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.46□□□□□ -2.34
NUP98P52948 BNIP3P16-201ENST00000589779 534 ntBASIC0.46□□□□□ -2.34
NUP98P52948 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms