Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CYCSP48-201ENST00000417124 323 ntBASIC2.3□□□□□ -2.04
PDX1P52945 AL645568.3-201ENST00000433683 316 ntBASIC2.3□□□□□ -2.04
PDX1P52945 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.3□□□□□ -2.04
PDX1P52945 AC104389.3-201ENST00000445629 235 ntBASIC2.3□□□□□ -2.04
PDX1P52945 U8.21-201ENST00000459536 136 ntBASIC2.3□□□□□ -2.04
PDX1P52945 AC080013.2-201ENST00000460866 323 ntBASIC2.3□□□□□ -2.04
PDX1P52945 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.3□□□□□ -2.04
PDX1P52945 SNORA31.16-201ENST00000516773 139 ntBASIC2.3□□□□□ -2.04
PDX1P52945 AC109329.1-201ENST00000518744 317 ntBASIC2.3□□□□□ -2.04
PDX1P52945 AP005902.1-201ENST00000521358 186 ntBASIC2.3□□□□□ -2.04
PDX1P52945 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.3□□□□□ -2.04
PDX1P52945 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.3□□□□□ -2.04
PDX1P52945 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.3□□□□□ -2.04
PDX1P52945 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
PDX1P52945 AL022345.1-201ENST00000607292 135 ntBASIC2.3□□□□□ -2.04
PDX1P52945 AL161423.1-201ENST00000613700 262 ntBASIC2.3□□□□□ -2.04
PDX1P52945 MIR1291-201ENST00000627649 87 ntBASIC2.3□□□□□ -2.04
PDX1P52945 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PDX1P52945 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDX1P52945 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDX1P52945 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PDX1P52945 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PDX1P52945 RNU6-655P-201ENST00000362858 107 ntBASIC2.29□□□□□ -2.04
PDX1P52945 RNU6-227P-201ENST00000362865 103 ntBASIC2.29□□□□□ -2.04
PDX1P52945 RNU6-1210P-201ENST00000363775 107 ntBASIC2.29□□□□□ -2.04
PDX1P52945 RNU6-1141P-201ENST00000364520 107 ntBASIC2.29□□□□□ -2.04
PDX1P52945 RNA5SP125-201ENST00000364843 120 ntBASIC2.29□□□□□ -2.04
PDX1P52945 Y_RNA.339-201ENST00000365325 102 ntBASIC2.29□□□□□ -2.04
PDX1P52945 SNORA36A-201ENST00000384221 132 ntBASIC2.29□□□□□ -2.04
PDX1P52945 MIR548K-201ENST00000408406 116 ntBASIC2.29□□□□□ -2.04
PDX1P52945 MTND4LP11-201ENST00000422184 280 ntBASIC2.29□□□□□ -2.04
PDX1P52945 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.29□□□□□ -2.04
PDX1P52945 Z82205.1-201ENST00000428456 297 ntBASIC2.29□□□□□ -2.04
PDX1P52945 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.29□□□□□ -2.04
PDX1P52945 HMGB1P18-201ENST00000438801 619 ntBASIC2.29□□□□□ -2.04
PDX1P52945 AC124916.1-201ENST00000444020 547 ntBASIC2.29□□□□□ -2.04
PDX1P52945 MTND3P10-201ENST00000450967 341 ntBASIC2.29□□□□□ -2.04
PDX1P52945 AL353752.1-201ENST00000454946 260 ntBASIC2.29□□□□□ -2.04
PDX1P52945 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.29□□□□□ -2.04
PDX1P52945 snoU13.23-201ENST00000458863 104 ntBASIC2.29□□□□□ -2.04
PDX1P52945 AC026436.1-201ENST00000510537 270 ntBASIC2.29□□□□□ -2.04
PDX1P52945 RNU6-507P-201ENST00000516045 100 ntBASIC2.29□□□□□ -2.04
PDX1P52945 RNU5F-2P-201ENST00000516066 82 ntBASIC2.29□□□□□ -2.04
PDX1P52945 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.29□□□□□ -2.04
PDX1P52945 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.29□□□□□ -2.04
PDX1P52945 HSPE1P4-201ENST00000550617 308 ntBASIC2.29□□□□□ -2.04
PDX1P52945 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.29□□□□□ -2.04
PDX1P52945 MIR3616-201ENST00000584070 92 ntBASIC2.29□□□□□ -2.04
PDX1P52945 RPL30P11-203ENST00000598995 310 ntBASIC2.29□□□□□ -2.04
PDX1P52945 uc_338.5-201ENST00000611839 155 ntBASIC2.29□□□□□ -2.04
PDX1P52945 AC092794.2-201ENST00000620933 563 ntBASIC2.29□□□□□ -2.04
PDX1P52945 AC007792.1-201ENST00000623023 402 ntBASIC2.29□□□□□ -2.04
PDX1P52945 TPTEP1-208ENST00000636884 213 ntBASIC2.29□□□□□ -2.04
PDX1P52945 AL450472.1-202ENST00000637286 180 ntBASIC2.29□□□□□ -2.04
PDX1P52945 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.28□□□□□ -2.04
PDX1P52945 RNU6-1059P-201ENST00000363752 98 ntBASIC2.28□□□□□ -2.04
PDX1P52945 RNU6-933P-201ENST00000384424 107 ntBASIC2.28□□□□□ -2.04
PDX1P52945 MIR521-1-201ENST00000384902 87 ntBASIC2.28□□□□□ -2.04
PDX1P52945 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.28□□□□□ -2.04
PDX1P52945 DPH3P2-201ENST00000422618 250 ntBASIC2.28□□□□□ -2.04
PDX1P52945 AL133396.1-201ENST00000432048 687 ntBASIC2.28□□□□□ -2.04
PDX1P52945 RPS3AP52-201ENST00000435639 297 ntBASIC2.28□□□□□ -2.04
PDX1P52945 CR769767.1-201ENST00000436337 346 ntBASIC2.28□□□□□ -2.04
PDX1P52945 AC096638.1-201ENST00000444678 216 ntBASIC2.28□□□□□ -2.04
PDX1P52945 AC091951.2-201ENST00000500762 203 ntBASIC2.28□□□□□ -2.04
PDX1P52945 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.28□□□□□ -2.04
PDX1P52945 AC134698.4-201ENST00000523451 826 ntBASIC2.28□□□□□ -2.04
PDX1P52945 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.28□□□□□ -2.04
PDX1P52945 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.28□□□□□ -2.04
PDX1P52945 FO624990.1-201ENST00000636373 85 ntBASIC2.28□□□□□ -2.04
PDX1P52945 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
PDX1P52945 MIR6073-201ENST00000352083 89 ntBASIC2.27□□□□□ -2.05
PDX1P52945 snoU2_19.1-201ENST00000362361 80 ntBASIC2.27□□□□□ -2.05
PDX1P52945 Y_RNA.123-201ENST00000363338 102 ntBASIC2.27□□□□□ -2.05
PDX1P52945 U8.8-201ENST00000365399 135 ntBASIC2.27□□□□□ -2.05
PDX1P52945 Y_RNA.473-201ENST00000384333 102 ntBASIC2.27□□□□□ -2.05
PDX1P52945 RNU6-790P-201ENST00000384479 105 ntBASIC2.27□□□□□ -2.05
PDX1P52945 RNU6-1072P-201ENST00000384703 107 ntBASIC2.27□□□□□ -2.05
PDX1P52945 RNU6-443P-201ENST00000384780 107 ntBASIC2.27□□□□□ -2.05
PDX1P52945 RN7SKP61-201ENST00000410642 295 ntBASIC2.27□□□□□ -2.05
PDX1P52945 AL139396.1-201ENST00000421137 167 ntBASIC2.27□□□□□ -2.05
PDX1P52945 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.27□□□□□ -2.05
PDX1P52945 HMGN2P3-201ENST00000433603 273 ntBASIC2.27□□□□□ -2.05
PDX1P52945 AC244670.1-201ENST00000436879 112 ntBASIC2.27□□□□□ -2.05
PDX1P52945 HMGN2P5-201ENST00000436882 273 ntBASIC2.27□□□□□ -2.05
PDX1P52945 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PDX1P52945 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.27□□□□□ -2.05
PDX1P52945 PCMTD1P1-201ENST00000455560 355 ntBASIC2.27□□□□□ -2.05
PDX1P52945 RPL30P1-201ENST00000488676 339 ntBASIC2.27□□□□□ -2.05
PDX1P52945 Y_RNA.691-201ENST00000516611 103 ntBASIC2.27□□□□□ -2.05
PDX1P52945 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.27□□□□□ -2.05
PDX1P52945 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.27□□□□□ -2.05
PDX1P52945 CBX3P7-201ENST00000532876 502 ntBASIC2.27□□□□□ -2.05
PDX1P52945 AC005668.1-201ENST00000571142 476 ntBASIC2.27□□□□□ -2.05
PDX1P52945 AC078795.3-201ENST00000602913 472 ntBASIC2.27□□□□□ -2.05
PDX1P52945 MIR6128-201ENST00000615528 109 ntBASIC2.27□□□□□ -2.05
PDX1P52945 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.27□□□□□ -2.05
PDX1P52945 SNORD98-201ENST00000636377 67 ntBASIC2.27□□□□□ -2.05
PDX1P52945 AC009541.1-201ENST00000438279 2662 ntBASIC2.27□□□□□ -2.05
PDX1P52945 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms