Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MTND3P5-201ENST00000512798 333 ntBASIC0.28□□□□□ -2.36
SRP9P49458 RNU6-922P-201ENST00000516753 99 ntBASIC0.28□□□□□ -2.36
SRP9P49458 RNU6-334P-201ENST00000517072 102 ntBASIC0.28□□□□□ -2.36
SRP9P49458 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.28□□□□□ -2.36
SRP9P49458 AP001893.2-201ENST00000526949 202 ntBASIC0.28□□□□□ -2.36
SRP9P49458 AL031281.1-201ENST00000604049 488 ntBASIC0.28□□□□□ -2.36
SRP9P49458 AL022154.1-201ENST00000604698 785 ntBASIC0.28□□□□□ -2.36
SRP9P49458 AP001596.2-201ENST00000608410 312 ntBASIC0.28□□□□□ -2.36
SRP9P49458 AC008147.4-201ENST00000617570 1204 ntBASIC0.28□□□□□ -2.36
SRP9P49458 AC097372.5-201ENST00000623665 376 ntBASIC0.28□□□□□ -2.36
SRP9P49458 AC068787.1-201ENST00000623908 691 ntBASIC0.28□□□□□ -2.36
SRP9P49458 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.28□□□□□ -2.36
SRP9P49458 Y_RNA.118-201ENST00000363300 101 ntBASIC0.27□□□□□ -2.37
SRP9P49458 MTCO1P21-201ENST00000416634 589 ntBASIC0.27□□□□□ -2.37
SRP9P49458 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.27□□□□□ -2.37
SRP9P49458 RPL23AP95-201ENST00000426806 265 ntBASIC0.27□□□□□ -2.37
SRP9P49458 NDUFB1P2-201ENST00000449477 176 ntBASIC0.27□□□□□ -2.37
SRP9P49458 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.27□□□□□ -2.37
SRP9P49458 AC092991.1-201ENST00000477176 376 ntBASIC0.27□□□□□ -2.37
SRP9P49458 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.27□□□□□ -2.37
SRP9P49458 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
SRP9P49458 DEFB131E-202ENST00000602581 683 ntBASIC0.27□□□□□ -2.37
SRP9P49458 Z83818.1-201ENST00000603584 150 ntBASIC0.27□□□□□ -2.37
SRP9P49458 AP002802.2-201ENST00000605877 235 ntBASIC0.27□□□□□ -2.37
SRP9P49458 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.27□□□□□ -2.37
SRP9P49458 RNU6-37P-201ENST00000362692 107 ntBASIC0.26□□□□□ -2.37
SRP9P49458 SNORD114-23-201ENST00000363536 72 ntBASIC0.26□□□□□ -2.37
SRP9P49458 RNU6-11P-201ENST00000364234 107 ntBASIC0.26□□□□□ -2.37
SRP9P49458 RNU6-1335P-201ENST00000365426 107 ntBASIC0.26□□□□□ -2.37
SRP9P49458 RNU6-946P-201ENST00000383878 107 ntBASIC0.26□□□□□ -2.37
SRP9P49458 RNU6-1105P-201ENST00000384774 107 ntBASIC0.26□□□□□ -2.37
SRP9P49458 MTCO2P12-201ENST00000427426 682 ntBASIC0.26□□□□□ -2.37
SRP9P49458 AC092423.1-201ENST00000430165 186 ntBASIC0.26□□□□□ -2.37
SRP9P49458 MTCYBP1-201ENST00000454315 1119 ntBASIC0.26□□□□□ -2.37
SRP9P49458 AC098869.1-201ENST00000481627 292 ntBASIC0.26□□□□□ -2.37
SRP9P49458 RPS26P48-201ENST00000491713 339 ntBASIC0.26□□□□□ -2.37
SRP9P49458 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC0.26□□□□□ -2.37
SRP9P49458 RNA5SP134-201ENST00000516492 96 ntBASIC0.26□□□□□ -2.37
SRP9P49458 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.26□□□□□ -2.37
SRP9P49458 MIR5695-201ENST00000579717 85 ntBASIC0.26□□□□□ -2.37
SRP9P49458 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.26□□□□□ -2.37
SRP9P49458 MIR4742-201ENST00000581069 85 ntBASIC0.26□□□□□ -2.37
SRP9P49458 HMGN1P30-201ENST00000589286 268 ntBASIC0.26□□□□□ -2.37
SRP9P49458 AL353778.1-201ENST00000603149 408 ntBASIC0.26□□□□□ -2.37
SRP9P49458 AC112191.3-201ENST00000604371 277 ntBASIC0.26□□□□□ -2.37
SRP9P49458 AC007742.2-201ENST00000618226 398 ntBASIC0.26□□□□□ -2.37
SRP9P49458 AC131159.1-201ENST00000621854 213 ntBASIC0.26□□□□□ -2.37
SRP9P49458 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
SRP9P49458 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
SRP9P49458 RNU6-236P-201ENST00000363886 106 ntBASIC0.25□□□□□ -2.37
SRP9P49458 RNU6-384P-201ENST00000364900 104 ntBASIC0.25□□□□□ -2.37
SRP9P49458 MIR216A-201ENST00000385063 110 ntBASIC0.25□□□□□ -2.37
SRP9P49458 RPS20P10-201ENST00000451209 253 ntBASIC0.25□□□□□ -2.37
SRP9P49458 RNU7-14P-201ENST00000459331 62 ntBASIC0.25□□□□□ -2.37
SRP9P49458 HMGN1P12-201ENST00000499125 195 ntBASIC0.25□□□□□ -2.37
SRP9P49458 AC105758.1-201ENST00000506038 399 ntBASIC0.25□□□□□ -2.37
SRP9P49458 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.25□□□□□ -2.37
SRP9P49458 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.25□□□□□ -2.37
SRP9P49458 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.25□□□□□ -2.37
SRP9P49458 AC021506.2-201ENST00000612354 169 ntBASIC0.25□□□□□ -2.37
SRP9P49458 U6.42-201ENST00000618440 107 ntBASIC0.25□□□□□ -2.37
SRP9P49458 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.25□□□□□ -2.37
SRP9P49458 SNORD98-201ENST00000636377 67 ntBASIC0.25□□□□□ -2.37
SRP9P49458 RNU6-877P-201ENST00000383868 107 ntBASIC0.24□□□□□ -2.37
SRP9P49458 SNORA80D-201ENST00000384488 135 ntBASIC0.24□□□□□ -2.37
SRP9P49458 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.24□□□□□ -2.37
SRP9P49458 AC073614.1-201ENST00000438690 650 ntBASIC0.24□□□□□ -2.37
SRP9P49458 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.24□□□□□ -2.37
SRP9P49458 AL163973.1-201ENST00000484753 577 ntBASIC0.24□□□□□ -2.37
SRP9P49458 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SRP9P49458 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.24□□□□□ -2.37
SRP9P49458 RNU6-947P-201ENST00000516264 106 ntBASIC0.24□□□□□ -2.37
SRP9P49458 RNU6-1098P-201ENST00000516772 96 ntBASIC0.24□□□□□ -2.37
SRP9P49458 AC023050.2-201ENST00000544968 387 ntBASIC0.24□□□□□ -2.37
SRP9P49458 ZNF321P-202ENST00000550843 495 ntBASIC0.24□□□□□ -2.37
SRP9P49458 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.24□□□□□ -2.37
SRP9P49458 TPRKBP2-201ENST00000565969 475 ntBASIC0.24□□□□□ -2.37
SRP9P49458 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.24□□□□□ -2.37
SRP9P49458 AL929325.1-201ENST00000603096 117 ntBASIC0.24□□□□□ -2.37
SRP9P49458 AC012507.3-201ENST00000603556 477 ntBASIC0.24□□□□□ -2.37
SRP9P49458 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SRP9P49458 AC092574.1-201ENST00000609771 420 ntBASIC0.24□□□□□ -2.37
SRP9P49458 AC093875.1-201ENST00000623688 504 ntBASIC0.24□□□□□ -2.37
SRP9P49458 SNORD3E-202ENST00000627253 216 ntBASIC0.24□□□□□ -2.37
SRP9P49458 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
SRP9P49458 RNU6-78P-201ENST00000362897 107 ntBASIC0.23□□□□□ -2.37
SRP9P49458 RNU6-1285P-201ENST00000363480 105 ntBASIC0.23□□□□□ -2.37
SRP9P49458 RNU5B-4P-201ENST00000363508 111 ntBASIC0.23□□□□□ -2.37
SRP9P49458 SNORA33-201ENST00000363664 130 ntBASIC0.23□□□□□ -2.37
SRP9P49458 SNORD31B-201ENST00000364977 69 ntBASIC0.23□□□□□ -2.37
SRP9P49458 RNU6-1179P-201ENST00000384667 107 ntBASIC0.23□□□□□ -2.37
SRP9P49458 ELOCP17-201ENST00000414751 326 ntBASIC0.23□□□□□ -2.37
SRP9P49458 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.23□□□□□ -2.37
SRP9P49458 AC060773.1-201ENST00000421698 310 ntBASIC0.23□□□□□ -2.37
SRP9P49458 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.23□□□□□ -2.37
SRP9P49458 AL117351.1-201ENST00000438864 766 ntBASIC0.23□□□□□ -2.37
SRP9P49458 SNRPGP7-201ENST00000469016 106 ntBASIC0.23□□□□□ -2.37
SRP9P49458 MTND2P7-201ENST00000521337 640 ntBASIC0.23□□□□□ -2.37
SRP9P49458 AC115990.1-201ENST00000526957 301 ntBASIC0.23□□□□□ -2.37
SRP9P49458 AC011979.2-201ENST00000527568 352 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms