Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.98□□□□□ -1.93
TM4SF4P48230 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TM4SF4P48230 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
TM4SF4P48230 Y_RNA.40-201ENST00000362645 93 ntBASIC2.98□□□□□ -1.93
TM4SF4P48230 SNORA38-201ENST00000363946 132 ntBASIC2.98□□□□□ -1.93
TM4SF4P48230 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.98□□□□□ -1.93
TM4SF4P48230 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.98□□□□□ -1.93
TM4SF4P48230 AC009969.1-201ENST00000438726 172 ntBASIC2.98□□□□□ -1.93
TM4SF4P48230 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.98□□□□□ -1.93
TM4SF4P48230 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.98□□□□□ -1.93
TM4SF4P48230 UQCRHP3-201ENST00000451503 251 ntBASIC2.98□□□□□ -1.93
TM4SF4P48230 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.98□□□□□ -1.93
TM4SF4P48230 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.98□□□□□ -1.93
TM4SF4P48230 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.98□□□□□ -1.93
TM4SF4P48230 PTP4A1P4-201ENST00000512479 322 ntBASIC2.98□□□□□ -1.93
TM4SF4P48230 RNU6-586P-201ENST00000517265 104 ntBASIC2.98□□□□□ -1.93
TM4SF4P48230 AC105029.1-201ENST00000520250 669 ntBASIC2.98□□□□□ -1.93
TM4SF4P48230 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.98□□□□□ -1.93
TM4SF4P48230 AC109446.1-201ENST00000566172 220 ntBASIC2.98□□□□□ -1.93
TM4SF4P48230 MIR5571-201ENST00000577998 113 ntBASIC2.98□□□□□ -1.93
TM4SF4P48230 MIR4506-201ENST00000584693 77 ntBASIC2.98□□□□□ -1.93
TM4SF4P48230 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TM4SF4P48230 MT-TD-201ENST00000387419 68 ntBASIC2.97□□□□□ -1.93
TM4SF4P48230 AL079342.1-201ENST00000401460 267 ntBASIC2.97□□□□□ -1.93
TM4SF4P48230 AL591034.2-201ENST00000402839 359 ntBASIC2.97□□□□□ -1.93
TM4SF4P48230 HMGB1P35-201ENST00000503360 598 ntBASIC2.97□□□□□ -1.93
TM4SF4P48230 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.97□□□□□ -1.93
TM4SF4P48230 RNU5F-2P-201ENST00000516066 82 ntBASIC2.97□□□□□ -1.93
TM4SF4P48230 RNU6-307P-201ENST00000516743 106 ntBASIC2.97□□□□□ -1.93
TM4SF4P48230 Y_RNA.708-201ENST00000516950 96 ntBASIC2.97□□□□□ -1.93
TM4SF4P48230 AC113139.1-201ENST00000605049 239 ntBASIC2.97□□□□□ -1.93
TM4SF4P48230 RMST_8.1-201ENST00000610287 165 ntBASIC2.97□□□□□ -1.93
TM4SF4P48230 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
TM4SF4P48230 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
TM4SF4P48230 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.97□□□□□ -1.93
TM4SF4P48230 AC233981.2-201ENST00000611524 1614 ntBASIC2.97□□□□□ -1.93
TM4SF4P48230 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.97□□□□□ -1.93
TM4SF4P48230 snoU2_19.1-201ENST00000362361 80 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 Y_RNA.356-201ENST00000365475 113 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 RNU1-109P-201ENST00000383960 147 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 AIMP1P2-201ENST00000425294 312 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.94
TM4SF4P48230 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.96□□□□□ -1.94
TM4SF4P48230 AC023824.2-201ENST00000566185 400 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 MIR3923-201ENST00000579521 83 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 FGF7P1-201ENST00000582820 288 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.96□□□□□ -1.94
TM4SF4P48230 AC060766.3-201ENST00000591442 263 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 AL355297.2-201ENST00000604792 129 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 AL138963.2-201ENST00000605137 226 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 AL353997.5-201ENST00000618886 171 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.96□□□□□ -1.94
TM4SF4P48230 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.96□□□□□ -1.94
TM4SF4P48230 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.96□□□□□ -1.94
TM4SF4P48230 MTND5P9-201ENST00000503854 1755 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 RNU6-784P-201ENST00000384330 106 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TM4SF4P48230 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 EIF4EP2-201ENST00000422816 654 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 AL161788.1-201ENST00000441805 169 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.95□□□□□ -1.94
TM4SF4P48230 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.95□□□□□ -1.94
TM4SF4P48230 AC103975.1-201ENST00000482506 483 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 AC091874.1-201ENST00000511402 339 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.95□□□□□ -1.94
TM4SF4P48230 MTCO3P13-201ENST00000577757 781 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 MIR3605-201ENST00000583214 100 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.95□□□□□ -1.94
TM4SF4P48230 AC018462.2-201ENST00000605375 395 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 AC133104.2-201ENST00000615272 193 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 AC009233.1-201ENST00000616477 371 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 MIR1302-1-201ENST00000637932 143 ntBASIC2.95□□□□□ -1.94
TM4SF4P48230 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.95□□□□□ -1.94
TM4SF4P48230 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TM4SF4P48230 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TM4SF4P48230 Y_RNA.2-201ENST00000362330 96 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 Y_RNA.70-201ENST00000362886 110 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 Y_RNA.263-201ENST00000364659 114 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 RNU6-867P-201ENST00000364956 107 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 Y_RNA.339-201ENST00000365325 102 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 RNU6-1286P-201ENST00000383871 107 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 AL359511.1-201ENST00000402970 211 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 HMGB3P2-201ENST00000411913 584 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.94□□□□□ -1.94
TM4SF4P48230 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.94□□□□□ -1.94
TM4SF4P48230 USP9YP30-201ENST00000430729 455 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 RPS12P2-201ENST00000439728 269 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.94□□□□□ -1.94
TM4SF4P48230 MTND4P17-201ENST00000470444 350 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 SRIP1-201ENST00000489235 288 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 RNU6-507P-201ENST00000516045 100 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 RNA5SP458-201ENST00000516188 119 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.94□□□□□ -1.94
TM4SF4P48230 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.94□□□□□ -1.94
TM4SF4P48230 AC009994.1-201ENST00000606889 253 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 AC137590.2-201ENST00000619709 240 ntBASIC2.94□□□□□ -1.94
TM4SF4P48230 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.94□□□□□ -1.94
TM4SF4P48230 AC069528.2-201ENST00000624849 1991 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms