Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC078809.1-201ENST00000427601 140 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 SNAP23P1-201ENST00000433229 246 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 AC015922.2-201ENST00000435593 184 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.36□□□□□ -2.19
SLC1A1P43005 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.36□□□□□ -2.19
SLC1A1P43005 MTND1P18-201ENST00000448191 573 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SLC1A1P43005 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.36□□□□□ -2.19
SLC1A1P43005 AC097473.1-201ENST00000508142 408 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 AC025465.3-201ENST00000510570 311 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 MTCO3P28-201ENST00000513351 515 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 SNORA25.17-201ENST00000517184 124 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 AC060788.1-201ENST00000521318 469 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 AL161670.1-201ENST00000554348 137 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.36□□□□□ -2.19
SLC1A1P43005 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.36□□□□□ -2.19
SLC1A1P43005 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.36□□□□□ -2.19
SLC1A1P43005 MIR5094-201ENST00000578766 85 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.36□□□□□ -2.19
SLC1A1P43005 AC078795.3-201ENST00000602913 472 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 uc_338.11-201ENST00000619132 160 ntBASIC1.36□□□□□ -2.19
SLC1A1P43005 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SLC1A1P43005 RNU6-112P-201ENST00000363599 104 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 RNU6-438P-201ENST00000365561 103 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 RNU5A-2P-201ENST00000384337 116 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 MT-TH-201ENST00000387441 69 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.35□□□□□ -2.19
SLC1A1P43005 AC139712.2-201ENST00000424302 339 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 AL133217.1-201ENST00000450980 425 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 AC087477.1-201ENST00000465747 340 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 AC114801.2-201ENST00000503825 781 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.35□□□□□ -2.19
SLC1A1P43005 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.35□□□□□ -2.19
SLC1A1P43005 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.35□□□□□ -2.19
SLC1A1P43005 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.35□□□□□ -2.19
SLC1A1P43005 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.35□□□□□ -2.19
SLC1A1P43005 AC103996.1-201ENST00000555468 102 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 MIR3923-201ENST00000579521 83 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.35□□□□□ -2.19
SLC1A1P43005 MIR4303-201ENST00000581299 66 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 RSL24D1P11-201ENST00000591045 491 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 PRR13P7-201ENST00000605538 430 ntBASIC1.35□□□□□ -2.19
SLC1A1P43005 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
SLC1A1P43005 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
SLC1A1P43005 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SLC1A1P43005 MTND5P9-201ENST00000503854 1755 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
SLC1A1P43005 FGF7P2-201ENST00000332473 296 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 AC092268.1-201ENST00000342691 405 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 RNU6-266P-201ENST00000364225 107 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 RNU6-827P-201ENST00000365553 106 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 RNU6-248P-201ENST00000410720 107 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 RNU2-41P-201ENST00000410991 178 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 RPL21P111-201ENST00000418453 477 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.19
SLC1A1P43005 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.34□□□□□ -2.19
SLC1A1P43005 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SLC1A1P43005 AC133104.1-201ENST00000429100 218 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.34□□□□□ -2.19
SLC1A1P43005 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.34□□□□□ -2.19
SLC1A1P43005 SNRPGP9-201ENST00000456025 225 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 AC022364.2-201ENST00000457963 554 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 SCARNA18-201ENST00000459004 134 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.34□□□□□ -2.19
SLC1A1P43005 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.34□□□□□ -2.19
SLC1A1P43005 AK3P2-201ENST00000507976 429 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.34□□□□□ -2.19
SLC1A1P43005 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.34□□□□□ -2.19
SLC1A1P43005 RN7SKP219-201ENST00000516825 296 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.34□□□□□ -2.19
SLC1A1P43005 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.34□□□□□ -2.19
SLC1A1P43005 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.34□□□□□ -2.19
SLC1A1P43005 AL356157.2-201ENST00000605122 111 ntBASIC1.34□□□□□ -2.19
SLC1A1P43005 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SLC1A1P43005 U3.9-201ENST00000363823 204 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 SNORA32.2-201ENST00000384049 122 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 RNY3P10-201ENST00000384764 102 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 SNORA12.2-201ENST00000391040 156 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 RNU6-482P-201ENST00000391068 107 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 SNORA26.3-201ENST00000391119 136 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 SNORA40.6-201ENST00000391153 128 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 SNORA26.8-201ENST00000391306 124 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.33□□□□□ -2.2
SLC1A1P43005 MTND2P18-201ENST00000419962 1030 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 RPL23AP95-201ENST00000426806 265 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 AL133396.1-201ENST00000432048 687 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.33□□□□□ -2.2
SLC1A1P43005 RPS29P29-201ENST00000456396 171 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 snoU13.9-201ENST00000458927 103 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.33□□□□□ -2.2
SLC1A1P43005 AC091874.1-201ENST00000511402 339 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 SUMO2P18-201ENST00000518873 252 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.33□□□□□ -2.2
SLC1A1P43005 AGGF1P4-201ENST00000568249 801 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 PCGEM1.1-201ENST00000613431 131 ntBASIC1.33□□□□□ -2.2
SLC1A1P43005 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.33□□□□□ -2.2
SLC1A1P43005 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms