Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 RNU6-1210P-201ENST00000363775 107 ntBASIC1.77□□□□□ -2.13
RFC4P35249 RNU4-42P-201ENST00000364738 142 ntBASIC1.77□□□□□ -2.13
RFC4P35249 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
RFC4P35249 Y_RNA.359-201ENST00000365498 102 ntBASIC1.77□□□□□ -2.13
RFC4P35249 SNORA16.2-201ENST00000390991 127 ntBASIC1.77□□□□□ -2.13
RFC4P35249 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.77□□□□□ -2.13
RFC4P35249 PRPS1P1-201ENST00000445305 876 ntBASIC1.77□□□□□ -2.13
RFC4P35249 RNU2-69P-201ENST00000516061 100 ntBASIC1.77□□□□□ -2.13
RFC4P35249 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.77□□□□□ -2.13
RFC4P35249 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.77□□□□□ -2.13
RFC4P35249 AP003392.2-201ENST00000527269 208 ntBASIC1.77□□□□□ -2.13
RFC4P35249 AC006362.1-201ENST00000567392 174 ntBASIC1.77□□□□□ -2.13
RFC4P35249 MIR3198-2-201ENST00000577868 80 ntBASIC1.77□□□□□ -2.13
RFC4P35249 MTATP6P3-201ENST00000581686 676 ntBASIC1.77□□□□□ -2.13
RFC4P35249 AC068790.2-201ENST00000602601 557 ntBASIC1.77□□□□□ -2.13
RFC4P35249 AC004908.3-201ENST00000610248 625 ntBASIC1.77□□□□□ -2.13
RFC4P35249 AC063943.3-201ENST00000615562 356 ntBASIC1.77□□□□□ -2.13
RFC4P35249 AC007792.1-201ENST00000623023 402 ntBASIC1.77□□□□□ -2.13
RFC4P35249 U4.7-201ENST00000638126 106 ntBASIC1.77□□□□□ -2.13
RFC4P35249 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.77□□□□□ -2.13
RFC4P35249 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RFC4P35249 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RFC4P35249 RNU1-22P-201ENST00000363334 158 ntBASIC1.76□□□□□ -2.13
RFC4P35249 RNU6-944P-201ENST00000364023 107 ntBASIC1.76□□□□□ -2.13
RFC4P35249 RNY1-201ENST00000364228 113 ntBASIC1.76□□□□□ -2.13
RFC4P35249 Y_RNA.381-201ENST00000365666 102 ntBASIC1.76□□□□□ -2.13
RFC4P35249 RNU6-1127P-201ENST00000384580 107 ntBASIC1.76□□□□□ -2.13
RFC4P35249 Y_RNA.540-201ENST00000384638 111 ntBASIC1.76□□□□□ -2.13
RFC4P35249 RNU6-606P-201ENST00000384721 111 ntBASIC1.76□□□□□ -2.13
RFC4P35249 RNU11-3P-201ENST00000391111 133 ntBASIC1.76□□□□□ -2.13
RFC4P35249 CBX3P9-201ENST00000402326 552 ntBASIC1.76□□□□□ -2.13
RFC4P35249 RNU2-32P-201ENST00000411193 191 ntBASIC1.76□□□□□ -2.13
RFC4P35249 MTATP6P18-201ENST00000417994 673 ntBASIC1.76□□□□□ -2.13
RFC4P35249 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.76□□□□□ -2.13
RFC4P35249 MTCYBP8-201ENST00000422855 651 ntBASIC1.76□□□□□ -2.13
RFC4P35249 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.76□□□□□ -2.13
RFC4P35249 MTCO2P16-201ENST00000436962 677 ntBASIC1.76□□□□□ -2.13
RFC4P35249 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.76□□□□□ -2.13
RFC4P35249 RNU6-965P-201ENST00000516721 96 ntBASIC1.76□□□□□ -2.13
RFC4P35249 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.76□□□□□ -2.13
RFC4P35249 CYCSP27-201ENST00000527643 293 ntBASIC1.76□□□□□ -2.13
RFC4P35249 AP005435.4-201ENST00000529514 284 ntBASIC1.76□□□□□ -2.13
RFC4P35249 MIR5583-1-201ENST00000580941 59 ntBASIC1.76□□□□□ -2.13
RFC4P35249 MIR4285-201ENST00000581001 85 ntBASIC1.76□□□□□ -2.13
RFC4P35249 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.76□□□□□ -2.13
RFC4P35249 AC110760.3-201ENST00000598794 467 ntBASIC1.76□□□□□ -2.13
RFC4P35249 AC002044.1-201ENST00000606707 158 ntBASIC1.76□□□□□ -2.13
RFC4P35249 AC109347.2-201ENST00000610220 349 ntBASIC1.76□□□□□ -2.13
RFC4P35249 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
RFC4P35249 AL159153.1-201ENST00000619688 317 ntBASIC1.76□□□□□ -2.13
RFC4P35249 AL133216.2-202ENST00000634512 349 ntBASIC1.76□□□□□ -2.13
RFC4P35249 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
RFC4P35249 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.76□□□□□ -2.13
RFC4P35249 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
RFC4P35249 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.75□□□□□ -2.13
RFC4P35249 RNU6-428P-201ENST00000362942 107 ntBASIC1.75□□□□□ -2.13
RFC4P35249 Y_RNA.112-201ENST00000363250 102 ntBASIC1.75□□□□□ -2.13
RFC4P35249 RNU6-611P-201ENST00000384276 104 ntBASIC1.75□□□□□ -2.13
RFC4P35249 Y_RNA.553-201ENST00000384670 102 ntBASIC1.75□□□□□ -2.13
RFC4P35249 RNY3P9-201ENST00000384727 106 ntBASIC1.75□□□□□ -2.13
RFC4P35249 MIR934-201ENST00000401241 83 ntBASIC1.75□□□□□ -2.13
RFC4P35249 UBE2V1P4-201ENST00000425374 344 ntBASIC1.75□□□□□ -2.13
RFC4P35249 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.75□□□□□ -2.13
RFC4P35249 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.75□□□□□ -2.13
RFC4P35249 SNRPGP7-201ENST00000469016 106 ntBASIC1.75□□□□□ -2.13
RFC4P35249 AC010424.1-201ENST00000506336 297 ntBASIC1.75□□□□□ -2.13
RFC4P35249 RNU6-377P-201ENST00000515965 102 ntBASIC1.75□□□□□ -2.13
RFC4P35249 Y_RNA.670-201ENST00000516255 105 ntBASIC1.75□□□□□ -2.13
RFC4P35249 AL356057.1-201ENST00000533798 831 ntBASIC1.75□□□□□ -2.13
RFC4P35249 AC084364.2-201ENST00000546924 395 ntBASIC1.75□□□□□ -2.13
RFC4P35249 AC010928.2-201ENST00000588017 287 ntBASIC1.75□□□□□ -2.13
RFC4P35249 RSL24D1P11-201ENST00000591045 491 ntBASIC1.75□□□□□ -2.13
RFC4P35249 CYP2C61P-201ENST00000604072 290 ntBASIC1.75□□□□□ -2.13
RFC4P35249 AC104073.3-201ENST00000610942 955 ntBASIC1.75□□□□□ -2.13
RFC4P35249 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
RFC4P35249 AC022418.1-201ENST00000624118 445 ntBASIC1.75□□□□□ -2.13
RFC4P35249 RNU6-1120P-201ENST00000362988 108 ntBASIC1.74□□□□□ -2.13
RFC4P35249 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.74□□□□□ -2.13
RFC4P35249 RNU6-546P-201ENST00000383991 107 ntBASIC1.74□□□□□ -2.13
RFC4P35249 RNU6-434P-201ENST00000384376 107 ntBASIC1.74□□□□□ -2.13
RFC4P35249 RNU6-903P-201ENST00000391270 109 ntBASIC1.74□□□□□ -2.13
RFC4P35249 RNU2-48P-201ENST00000410694 191 ntBASIC1.74□□□□□ -2.13
RFC4P35249 RNU6-293P-201ENST00000411259 106 ntBASIC1.74□□□□□ -2.13
RFC4P35249 AC098826.2-201ENST00000452011 651 ntBASIC1.74□□□□□ -2.13
RFC4P35249 snoU13.14-201ENST00000459372 104 ntBASIC1.74□□□□□ -2.13
RFC4P35249 AC079382.1-201ENST00000493346 557 ntBASIC1.74□□□□□ -2.13
RFC4P35249 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.74□□□□□ -2.13
RFC4P35249 LRRC34P2-201ENST00000514850 553 ntBASIC1.74□□□□□ -2.13
RFC4P35249 Y_RNA.688-201ENST00000516565 95 ntBASIC1.74□□□□□ -2.13
RFC4P35249 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
RFC4P35249 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.74□□□□□ -2.13
RFC4P35249 AP005660.1-201ENST00000522972 293 ntBASIC1.74□□□□□ -2.13
RFC4P35249 AP001893.2-201ENST00000526949 202 ntBASIC1.74□□□□□ -2.13
RFC4P35249 AC023050.3-201ENST00000541142 333 ntBASIC1.74□□□□□ -2.13
RFC4P35249 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.74□□□□□ -2.13
RFC4P35249 AGGF1P4-201ENST00000568249 801 ntBASIC1.74□□□□□ -2.13
RFC4P35249 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.74□□□□□ -2.13
RFC4P35249 AC010620.1-201ENST00000601088 1102 ntBASIC1.74□□□□□ -2.13
RFC4P35249 AC073648.5-201ENST00000603502 305 ntBASIC1.74□□□□□ -2.13
RFC4P35249 AL391646.1-201ENST00000603860 190 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms