Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 SNORA26.3-201ENST00000391119 136 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 RN7SKP61-201ENST00000410642 295 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 RNU2-66P-201ENST00000410650 161 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 SRIP3-201ENST00000413200 219 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SHMT2P34897 RPL23AP95-201ENST00000426806 265 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 MTND1P29-201ENST00000448112 647 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.64□□□□□ -2.15
SHMT2P34897 HMGN2P23-201ENST00000456759 269 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.64□□□□□ -2.15
SHMT2P34897 AC022447.4-201ENST00000504053 364 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 AK3P2-201ENST00000507976 429 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 PTP4A1P4-201ENST00000512479 322 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 MTND3P5-201ENST00000512798 333 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 SNORA31.16-201ENST00000516773 139 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 MTND4P7-201ENST00000523876 130 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.64□□□□□ -2.15
SHMT2P34897 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.64□□□□□ -2.15
SHMT2P34897 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.64□□□□□ -2.15
SHMT2P34897 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.64□□□□□ -2.15
SHMT2P34897 AC104581.2-201ENST00000572227 430 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 AC103987.3-201ENST00000582071 292 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.64□□□□□ -2.15
SHMT2P34897 RNU6-85P-201ENST00000605989 107 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 MIR8081-201ENST00000611533 95 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 AC139792.3-201ENST00000623525 224 ntBASIC1.64□□□□□ -2.15
SHMT2P34897 RNA5SP276-201ENST00000362580 94 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 MIR29C-201ENST00000385231 88 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 RNA5SP219-201ENST00000390940 113 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 SNORA12-201ENST00000391162 147 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.63□□□□□ -2.15
SHMT2P34897 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.63□□□□□ -2.15
SHMT2P34897 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.63□□□□□ -2.15
SHMT2P34897 AL590556.1-201ENST00000423231 483 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 AC244670.1-201ENST00000436879 112 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.63□□□□□ -2.15
SHMT2P34897 DNAJC19P4-201ENST00000440115 345 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.63□□□□□ -2.15
SHMT2P34897 SNRPGP7-201ENST00000469016 106 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 AC083798.1-201ENST00000472671 131 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.63□□□□□ -2.15
SHMT2P34897 AC145146.1-201ENST00000496370 254 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.63□□□□□ -2.15
SHMT2P34897 AC091874.1-201ENST00000511402 339 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.63□□□□□ -2.15
SHMT2P34897 AC104383.1-201ENST00000530297 370 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 AL118558.2-201ENST00000556294 238 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 MIR3136-201ENST00000583498 78 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 VN1R80P-201ENST00000597126 338 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 AC068792.1-201ENST00000621354 417 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 ZNF702P-202ENST00000434269 1966 ntBASIC1.63□□□□□ -2.15
SHMT2P34897 RNU6-743P-201ENST00000364151 106 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 RNU6-1164P-201ENST00000364428 107 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 RNU4-20P-201ENST00000365601 151 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 RNU6-142P-201ENST00000384019 107 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 SNORD73A-201ENST00000386062 65 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 BTF3L4P2-201ENST00000392798 346 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.62□□□□□ -2.15
SHMT2P34897 AL590135.1-201ENST00000422215 156 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AL358453.1-201ENST00000422522 250 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 BX510359.4-201ENST00000423750 193 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AC019205.3-201ENST00000424573 156 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 USP9YP14-201ENST00000430663 563 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AL121601.2-201ENST00000438019 707 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.62□□□□□ -2.15
SHMT2P34897 AC016700.2-201ENST00000446011 156 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.62□□□□□ -2.15
SHMT2P34897 RPL23AP3-201ENST00000453844 468 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 RNU7-138P-201ENST00000459479 64 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AC015911.1-201ENST00000495111 156 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.62□□□□□ -2.15
SHMT2P34897 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.62□□□□□ -2.15
SHMT2P34897 SNORA14.1-201ENST00000516113 141 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.62□□□□□ -2.15
SHMT2P34897 CENPUP1-201ENST00000526649 1202 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.62□□□□□ -2.15
SHMT2P34897 TRAV32-201ENST00000553993 340 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 NBR2-204ENST00000587322 63 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.62□□□□□ -2.15
SHMT2P34897 AP001836.1-201ENST00000604675 523 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AC025754.2-201ENST00000606491 432 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.62□□□□□ -2.15
SHMT2P34897 AL359757.2-201ENST00000624309 274 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 AL450472.1-202ENST00000637286 180 ntBASIC1.62□□□□□ -2.15
SHMT2P34897 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SHMT2P34897 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
SHMT2P34897 Y_RNA.409-201ENST00000383990 98 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 RNA5SP465-201ENST00000391195 109 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 AL033519.2-201ENST00000403958 392 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 RNA5SP201-201ENST00000410316 124 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.61□□□□□ -2.15
SHMT2P34897 MTND2P29-201ENST00000438595 412 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 Z83846.1-201ENST00000446798 265 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 MTCO3P38-201ENST00000468910 766 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 AC027575.1-201ENST00000481064 460 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 AC093259.1-201ENST00000509755 300 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 HSPE1P4-201ENST00000550617 308 ntBASIC1.61□□□□□ -2.15
SHMT2P34897 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms