Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU6-371P-201ENST00000364283 108 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 Y_RNA.395-201ENST00000383945 109 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 RNU6-606P-201ENST00000384721 111 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 MIR578-201ENST00000384828 96 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 FTH1P15-201ENST00000406984 280 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 SNORD23.1-201ENST00000408212 104 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 RNU4-26P-201ENST00000410270 107 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 RPL21P90-201ENST00000415692 466 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXC13P31276 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC13P31276 ERLEC1P1-201ENST00000433806 578 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 AC073415.1-201ENST00000449240 153 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 Y_RNA.635-201ENST00000459041 101 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 snoU109.2-201ENST00000459316 135 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 UBL5P3-201ENST00000475112 231 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.6□□□□□ -1.99
HOXC13P31276 AC093303.1-201ENST00000514549 295 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 RNU6-264P-201ENST00000517134 104 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 COPS8P3-201ENST00000526024 482 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.6□□□□□ -1.99
HOXC13P31276 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC13P31276 AC008269.2-201ENST00000561915 1105 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 AL138963.2-201ENST00000605137 226 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.6□□□□□ -1.99
HOXC13P31276 uc_338.22-201ENST00000622722 187 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 AC012640.5-201ENST00000623897 319 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 AC138627.2-201ENST00000624202 601 ntBASIC2.6□□□□□ -1.99
HOXC13P31276 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.6□□□□□ -1.99
HOXC13P31276 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC13P31276 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC13P31276 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC13P31276 Y_RNA.28-201ENST00000362554 111 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 RNU6-1287P-201ENST00000362914 107 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 RNA5SP99-201ENST00000364020 114 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 Y_RNA.301-201ENST00000364990 103 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 Y_RNA.367-201ENST00000365544 101 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 Y_RNA.452-201ENST00000384202 108 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 RNU6-1060P-201ENST00000384664 107 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 MIR10A-201ENST00000385043 110 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 MIR454-201ENST00000390180 115 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 RN7SKP223-201ENST00000410582 62 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC13P31276 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC13P31276 CBX3P6-201ENST00000430257 527 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 AL160004.2-201ENST00000432935 350 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 Z98949.2-201ENST00000440996 144 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 HIGD1AP2-201ENST00000446367 280 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC13P31276 RPL21P99-201ENST00000480369 423 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 AC011005.2-201ENST00000487324 359 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 HMGB1P30-201ENST00000492455 606 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.59□□□□□ -1.99
HOXC13P31276 RN7SKP24-201ENST00000515888 284 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 Y_RNA.665-201ENST00000516177 98 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 Y_RNA.682-201ENST00000516457 100 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 RNU6-988P-201ENST00000519081 107 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 APOOP3-201ENST00000536787 586 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HOXC13P31276 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC13P31276 SNRPGP18-201ENST00000553000 214 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 AL117187.1-201ENST00000555482 181 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.59□□□□□ -1.99
HOXC13P31276 AC004817.2-201ENST00000561794 651 ntBASIC2.59□□□□□ -1.99
HOXC13P31276 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HOXC13P31276 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
HOXC13P31276 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HOXC13P31276 SNORD3E-201ENST00000362899 217 ntBASIC2.58□□□□□ -2
HOXC13P31276 SNORA62.1-201ENST00000364287 154 ntBASIC2.58□□□□□ -2
HOXC13P31276 RNU1-91P-201ENST00000364746 163 ntBASIC2.58□□□□□ -2
HOXC13P31276 RNU4-66P-201ENST00000365199 138 ntBASIC2.58□□□□□ -2
HOXC13P31276 RNU6-26P-201ENST00000383985 107 ntBASIC2.58□□□□□ -2
HOXC13P31276 AL133475.1-201ENST00000404414 305 ntBASIC2.58□□□□□ -2
HOXC13P31276 AL355497.1-201ENST00000406262 551 ntBASIC2.58□□□□□ -2
HOXC13P31276 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.58□□□□□ -2
HOXC13P31276 MIR548F5-201ENST00000408421 86 ntBASIC2.58□□□□□ -2
HOXC13P31276 RNU6-370P-201ENST00000411008 104 ntBASIC2.58□□□□□ -2
HOXC13P31276 OR6C66P-201ENST00000414917 930 ntBASIC2.58□□□□□ -2
HOXC13P31276 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.58□□□□□ -2
HOXC13P31276 TOMM20P4-201ENST00000427861 435 ntBASIC2.58□□□□□ -2
HOXC13P31276 MTCYBP9-201ENST00000431021 303 ntBASIC2.58□□□□□ -2
HOXC13P31276 AC104058.1-201ENST00000448028 297 ntBASIC2.58□□□□□ -2
HOXC13P31276 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.58□□□□□ -2
HOXC13P31276 AL356010.1-201ENST00000456364 102 ntBASIC2.58□□□□□ -2
HOXC13P31276 RNU7-182P-201ENST00000459009 62 ntBASIC2.58□□□□□ -2
HOXC13P31276 RPS27AP9-201ENST00000477681 438 ntBASIC2.58□□□□□ -2
HOXC13P31276 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.58□□□□□ -2
HOXC13P31276 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.58□□□□□ -2
HOXC13P31276 CKS1BP7-201ENST00000522230 235 ntBASIC2.58□□□□□ -2
HOXC13P31276 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.58□□□□□ -2
HOXC13P31276 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.58□□□□□ -2
HOXC13P31276 MIR3126-201ENST00000577443 74 ntBASIC2.58□□□□□ -2
HOXC13P31276 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.58□□□□□ -2
HOXC13P31276 AL355297.2-201ENST00000604792 129 ntBASIC2.58□□□□□ -2
HOXC13P31276 AP000654.2-201ENST00000605633 586 ntBASIC2.58□□□□□ -2
HOXC13P31276 MIR6840-201ENST00000611937 71 ntBASIC2.58□□□□□ -2
HOXC13P31276 AC010378.1-201ENST00000619270 362 ntBASIC2.58□□□□□ -2
HOXC13P31276 AC241585.2-209ENST00000638217 143 ntBASIC2.58□□□□□ -2
HOXC13P31276 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HOXC13P31276 AC016717.2-201ENST00000609089 5141 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 263.6 ms