Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU1-95P-201ENST00000516357 160 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 RNU1-128P-201ENST00000516704 160 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 CYCSP23-201ENST00000519781 313 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 AC093331.1-201ENST00000521474 169 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXC12P31275 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXC12P31275 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.47□□□□□ -1.85
HOXC12P31275 MIR4423-201ENST00000580922 80 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXC12P31275 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.47□□□□□ -1.85
HOXC12P31275 AC005176.2-201ENST00000596933 147 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXC12P31275 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXC12P31275 AC091167.4-201ENST00000605079 184 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 uc_338.14-201ENST00000613162 166 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 PCGEM1.1-201ENST00000613431 131 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 AL773545.4-201ENST00000637262 310 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 AL513478.4-201ENST00000641636 310 ntBASIC3.47□□□□□ -1.85
HOXC12P31275 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.47□□□□□ -1.85
HOXC12P31275 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.47□□□□□ -1.85
HOXC12P31275 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
HOXC12P31275 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
HOXC12P31275 AC135776.4-201ENST00000624300 1904 ntBASIC3.46□□□□□ -1.85
HOXC12P31275 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC12P31275 MAPK10-253ENST00000641010 4072 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC12P31275 RNU6-655P-201ENST00000362858 107 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 RNU6-727P-201ENST00000363592 107 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 Y_RNA.230-201ENST00000364348 109 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 SNORA14A-201ENST00000364773 135 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 Y_RNA.498-201ENST00000384460 102 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 RNU1-57P-201ENST00000384491 166 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 Y_RNA.569-201ENST00000384749 103 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 Y_RNA.570-201ENST00000384750 101 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 RN7SKP156-201ENST00000410308 342 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 AL390729.2-201ENST00000416137 156 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.46□□□□□ -1.86
HOXC12P31275 Z98742.2-201ENST00000431564 187 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC12P31275 RPS27P26-201ENST00000494583 239 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 RNU6-138P-201ENST00000515952 107 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 CYCSP30-201ENST00000546447 172 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC12P31275 RNU1-30P-201ENST00000606575 163 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 AC006001.4-201ENST00000622243 395 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 AC018692.3-201ENST00000623929 123 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 AL034408.1-202ENST00000636088 415 ntBASIC3.46□□□□□ -1.86
HOXC12P31275 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC12P31275 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.46□□□□□ -1.86
HOXC12P31275 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HOXC12P31275 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC12P31275 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HOXC12P31275 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HOXC12P31275 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXC12P31275 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HOXC12P31275 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC12P31275 RNU4-15P-201ENST00000362613 141 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 RNU6-1210P-201ENST00000363775 107 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 RNA5SP399-201ENST00000364003 117 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 RNU6-200P-201ENST00000364743 107 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC12P31275 SNORA18.3-201ENST00000384122 132 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 MIR30B-201ENST00000384850 88 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 RNU2-14P-201ENST00000411053 191 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC12P31275 RNU6-625P-201ENST00000459412 107 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 AC091179.3-201ENST00000474761 144 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 AL121594.1-201ENST00000475906 575 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 RPL23AP70-201ENST00000483361 460 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC12P31275 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC12P31275 AC074133.1-201ENST00000515696 183 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 RNA5SP164-201ENST00000516533 110 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 RNU2-31P-201ENST00000516954 155 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 AC018448.1-201ENST00000552843 316 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 AC233702.2-202ENST00000562547 291 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXC12P31275 AC008749.1-201ENST00000597650 306 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 AC037487.3-201ENST00000606668 112 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC12P31275 AC099654.7-201ENST00000635788 2127 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 AL021368.2-201ENST00000606125 5352 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC12P31275 AL109809.4-201ENST00000603520 2185 ntBASIC3.45□□□□□ -1.86
HOXC12P31275 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC12P31275 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC12P31275 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC12P31275 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC12P31275 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC12P31275 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC12P31275 Y_RNA.111-201ENST00000363248 100 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 RNA5SP72-201ENST00000364442 117 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 Y_RNA.269-201ENST00000364685 89 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 SNORA72.2-201ENST00000365028 127 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 RNU6-326P-201ENST00000365480 107 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 SNORA5A-201ENST00000384111 134 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 RNA5SP201-201ENST00000410316 124 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 RPL23AP36-201ENST00000413895 458 ntBASIC3.44□□□□□ -1.86
HOXC12P31275 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC12P31275 AC009414.1-201ENST00000427200 443 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms