Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 RNU5A-4P-201ENST00000516588 111 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A5P29400 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A5P29400 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A5P29400 AP001893.2-201ENST00000526949 202 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 SNORA77B-201ENST00000578179 125 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.69□□□□□ -2.3
COL4A5P29400 BNIP3P31-201ENST00000604515 566 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 PART1_2.1-201ENST00000612397 250 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 AC099654.5-201ENST00000636479 350 ntBASIC0.69□□□□□ -2.3
COL4A5P29400 SNORA4.1-201ENST00000364263 144 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 RNU6-371P-201ENST00000364283 108 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 MIR520A-201ENST00000384862 85 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 RPS3AP36-201ENST00000398190 775 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 AC123900.1-201ENST00000420390 96 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 TXNL1P1-201ENST00000429528 554 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 RPL22P17-201ENST00000438729 315 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 MTND3P1-201ENST00000441336 220 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC0.68□□□□□ -2.3
COL4A5P29400 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.68□□□□□ -2.3
COL4A5P29400 AC130509.1-201ENST00000464158 433 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 OR2A41P-201ENST00000473586 105 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 AC022447.4-201ENST00000504053 364 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.68□□□□□ -2.3
COL4A5P29400 Y_RNA.687-201ENST00000516558 91 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 AC107934.1-201ENST00000522215 217 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.68□□□□□ -2.3
COL4A5P29400 AC013828.2-201ENST00000532487 235 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
COL4A5P29400 AC087883.1-201ENST00000551882 391 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.68□□□□□ -2.3
COL4A5P29400 AC018889.1-201ENST00000605372 397 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 AC091965.4-201ENST00000607691 587 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC0.68□□□□□ -2.3
COL4A5P29400 AC006386.1-201ENST00000619436 415 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 AC026585.1-201ENST00000619582 524 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
COL4A5P29400 AL138960.2-201ENST00000625145 535 ntBASIC0.68□□□□□ -2.3
COL4A5P29400 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.68□□□□□ -2.3
COL4A5P29400 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 RNU6-769P-201ENST00000384407 104 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 MRPL42P2-201ENST00000403169 426 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 PIGPP2-201ENST00000411569 458 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 AC114491.1-201ENST00000416095 246 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.67□□□□□ -2.3
COL4A5P29400 MTND4P20-201ENST00000424125 869 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 RPL37P21-201ENST00000435890 276 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 AP000797.1-201ENST00000478870 387 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 AC112206.3-201ENST00000514578 389 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 AC123904.2-201ENST00000548059 300 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.67□□□□□ -2.3
COL4A5P29400 MIR3136-201ENST00000583498 78 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 AC078795.2-201ENST00000602835 1252 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 AL139286.2-201ENST00000606838 396 ntBASIC0.67□□□□□ -2.3
COL4A5P29400 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.66□□□□□ -2.3
COL4A5P29400 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
COL4A5P29400 RNU6-511P-201ENST00000363496 107 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 RNU6-968P-201ENST00000384076 107 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 RPS20P2-201ENST00000402520 389 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 RNU6-293P-201ENST00000411259 106 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 MTND2P9-201ENST00000422293 931 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 RPS27P16-201ENST00000425758 201 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 C8orf59P1-201ENST00000429930 303 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 AL117351.1-201ENST00000438864 766 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 HSPE1P9-201ENST00000440046 311 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 PGBD4P5-201ENST00000445958 426 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 AC134050.1-201ENST00000495088 933 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 MTCO3P9-201ENST00000506989 781 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 AC097473.1-201ENST00000508142 408 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.66□□□□□ -2.3
COL4A5P29400 SUMO2P18-201ENST00000518873 252 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.66□□□□□ -2.3
COL4A5P29400 AL356057.1-201ENST00000533798 831 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.66□□□□□ -2.3
COL4A5P29400 MIR5589-201ENST00000579442 60 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 AL158042.1-201ENST00000605338 460 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
COL4A5P29400 AC243829.6-201ENST00000612652 106 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.66□□□□□ -2.3
COL4A5P29400 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
COL4A5P29400 RNU6-1285P-201ENST00000363480 105 ntBASIC0.65□□□□□ -2.3
COL4A5P29400 MTCO1P21-201ENST00000416634 589 ntBASIC0.65□□□□□ -2.3
COL4A5P29400 AC139712.2-201ENST00000424302 339 ntBASIC0.65□□□□□ -2.3
COL4A5P29400 AL589872.1-201ENST00000426602 288 ntBASIC0.65□□□□□ -2.3
COL4A5P29400 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.65□□□□□ -2.3
COL4A5P29400 HSPE1P13-201ENST00000451143 297 ntBASIC0.65□□□□□ -2.3
COL4A5P29400 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.65□□□□□ -2.3
COL4A5P29400 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.65□□□□□ -2.3
COL4A5P29400 SNORA62.5-201ENST00000516634 120 ntBASIC0.65□□□□□ -2.3
COL4A5P29400 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.65□□□□□ -2.3
COL4A5P29400 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.65□□□□□ -2.3
COL4A5P29400 MIR4514-201ENST00000581410 57 ntBASIC0.65□□□□□ -2.3
COL4A5P29400 MIR3118-1-201ENST00000581787 76 ntBASIC0.65□□□□□ -2.3
COL4A5P29400 HSPE1P19-201ENST00000603327 295 ntBASIC0.65□□□□□ -2.3
COL4A5P29400 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
COL4A5P29400 AL159152.1-201ENST00000635019 2587 ntBASIC0.65□□□□□ -2.31
COL4A5P29400 RNU6-862P-201ENST00000362804 105 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms