Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
ABCD3P28288 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.48□□□□□ -2.01
ABCD3P28288 RNU5B-2P-201ENST00000363036 113 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 SNORA5B-201ENST00000363786 132 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 RNU1-91P-201ENST00000364746 163 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 RNU6-306P-201ENST00000384617 107 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 MIR208B-201ENST00000401172 77 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 RNA5SP494-201ENST00000410653 129 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 RPS26P42-201ENST00000413485 326 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 AC005741.1-201ENST00000511094 432 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 RNA5SP356-201ENST00000515972 94 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 EIF4A1P12-201ENST00000551910 141 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.48□□□□□ -2.01
ABCD3P28288 RPL17P51-201ENST00000605218 238 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 AC009318.2-201ENST00000610917 651 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 AC005858.4-201ENST00000623191 700 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 AL133216.2-202ENST00000634512 349 ntBASIC2.48□□□□□ -2.01
ABCD3P28288 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
ABCD3P28288 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ABCD3P28288 SNORD50.1-201ENST00000362987 71 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 Y_RNA.500-201ENST00000384466 111 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 MIR548F5-201ENST00000408421 86 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 HMGB1P18-201ENST00000438801 619 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 AL353705.4-201ENST00000449661 238 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 AC079354.2-201ENST00000453523 154 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.47□□□□□ -2.01
ABCD3P28288 SNORD109B-201ENST00000458961 67 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 SNORD109A-201ENST00000459128 67 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 RN7SL297P-201ENST00000483161 293 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 AL117351.2-201ENST00000513571 157 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 RNU6-1016P-201ENST00000516689 94 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 RNU6-667P-201ENST00000517186 102 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 AC026271.5-201ENST00000577873 130 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 RPL12P50-201ENST00000603116 116 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 SNRPGP17-201ENST00000603780 214 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 AP000654.2-201ENST00000605633 586 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 AL132822.1-201ENST00000617063 513 ntBASIC2.47□□□□□ -2.01
ABCD3P28288 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
ABCD3P28288 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.01
ABCD3P28288 MTND5P9-201ENST00000503854 1755 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 RNU6-859P-201ENST00000362728 107 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 RNU6-1159P-201ENST00000362933 107 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 Y_RNA.390-201ENST00000383932 102 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 MIR524-201ENST00000385242 87 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 AC063976.3-201ENST00000426849 329 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 RPS3AP52-201ENST00000435639 297 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.46□□□□□ -2.02
ABCD3P28288 SNORD5.1-201ENST00000458800 75 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.46□□□□□ -2.02
ABCD3P28288 RN7SKP24-201ENST00000515888 284 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 HSPE1P18-201ENST00000517602 280 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 MRPS36P4-201ENST00000534436 298 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 MIR4319-201ENST00000577285 85 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 MIR5194-201ENST00000582634 120 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 MIR4635-201ENST00000583759 79 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 SNORD14A-201ENST00000606526 91 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 AC009994.1-201ENST00000606889 253 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.46□□□□□ -2.02
ABCD3P28288 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.46□□□□□ -2.02
ABCD3P28288 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.46□□□□□ -2.02
ABCD3P28288 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
ABCD3P28288 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.45□□□□□ -2.02
ABCD3P28288 AC062016.1-201ENST00000355719 319 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 Y_RNA.339-201ENST00000365325 102 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 RNU6-26P-201ENST00000383985 107 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 SNORA12-201ENST00000391162 147 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 AL356057.3-201ENST00000402607 340 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 RNU2-52P-201ENST00000410680 190 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 RNU2-48P-201ENST00000410694 191 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 RPL37P10-201ENST00000412884 288 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.45□□□□□ -2.02
ABCD3P28288 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.45□□□□□ -2.02
ABCD3P28288 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.45□□□□□ -2.02
ABCD3P28288 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
ABCD3P28288 SNORA4.4-201ENST00000515921 135 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 Y_RNA.691-201ENST00000516611 103 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 RNA5SP137-201ENST00000516833 135 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 AC109446.1-201ENST00000566172 220 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 MIR4273-201ENST00000582824 84 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 AC245884.12-201ENST00000615364 59 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 SCARNA4-201ENST00000629045 128 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 AC099654.5-201ENST00000636479 350 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 AP006437.1-201ENST00000641440 3685 ntBASIC2.45□□□□□ -2.02
ABCD3P28288 RNA5SP393-201ENST00000363423 117 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 SNORA25.6-201ENST00000364121 118 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 SNORA67.1-201ENST00000364749 141 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 RNU4-9P-201ENST00000364951 139 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 SNORD81.2-201ENST00000365153 76 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 RNU6-378P-201ENST00000384324 107 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
ABCD3P28288 RNU6-174P-201ENST00000410406 106 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 RNA5SP184-201ENST00000411071 108 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 EDDM3CP-201ENST00000415977 425 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 PDCL2P1-201ENST00000419302 352 ntBASIC2.44□□□□□ -2.02
ABCD3P28288 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms