Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AC023194.1-201ENST00000493084 308 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC116562.3-201ENST00000506136 177 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.15□□□□□ -2.22
COL5A3P25940 RNA5SP121-201ENST00000516537 101 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 RNU6-677P-201ENST00000516914 101 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 RNU6-410P-201ENST00000517006 107 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 RNU6-1315P-201ENST00000517187 99 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AP005902.1-201ENST00000521358 186 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.15□□□□□ -2.22
COL5A3P25940 AC068587.5-201ENST00000528506 175 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 OR5AL2P-201ENST00000532185 920 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 MIR3611-201ENST00000584484 83 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.15□□□□□ -2.22
COL5A3P25940 AL512605.2-201ENST00000592972 256 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AL022154.1-201ENST00000604698 785 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC008536.2-201ENST00000607284 349 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC069294.1-201ENST00000608397 350 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC093783.1-201ENST00000612976 329 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 MIR5739-201ENST00000619803 80 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC136475.10-201ENST00000620253 385 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 AC024940.5-201ENST00000622889 474 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 SEPT14P19-203ENST00000633205 211 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 OR5AK4P-201ENST00000635912 903 ntBASIC1.15□□□□□ -2.22
COL5A3P25940 Y_RNA.22-201ENST00000362492 102 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 RNU6-1120P-201ENST00000362988 108 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 RNU6-942P-201ENST00000363002 107 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 RNU5A-6P-201ENST00000384136 116 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 RNU6-1119P-201ENST00000384349 108 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 Y_RNA.534-201ENST00000384599 112 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 RNU6-658P-201ENST00000384606 106 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 RNU6-903P-201ENST00000391270 109 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
COL5A3P25940 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
COL5A3P25940 RNU2-9P-201ENST00000410194 145 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AL663109.1-201ENST00000411498 844 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AL160275.3-201ENST00000423876 471 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.15□□□□□ -2.23
COL5A3P25940 USP9YP14-201ENST00000430663 563 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 RPL31P35-201ENST00000431058 377 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 RPS15AP9-201ENST00000439856 381 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.15□□□□□ -2.23
COL5A3P25940 snoU109.2-201ENST00000459316 135 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AC027575.1-201ENST00000481064 460 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 RPS27AP10-201ENST00000496103 208 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.15□□□□□ -2.23
COL5A3P25940 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.15□□□□□ -2.23
COL5A3P25940 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.15□□□□□ -2.23
COL5A3P25940 MTND3P25-201ENST00000509243 135 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AC096745.1-201ENST00000509945 370 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 MTCO3P7-201ENST00000510008 774 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AC010493.1-201ENST00000513479 292 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 RNU6-1183P-201ENST00000517054 60 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.15□□□□□ -2.23
COL5A3P25940 MTND1P15-201ENST00000579262 949 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 MIR4775-201ENST00000581168 75 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AL021997.1-201ENST00000605757 193 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AC245008.1-201ENST00000608123 476 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 AC048344.4-201ENST00000619744 527 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 U6.114-201ENST00000636407 96 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 U6.99-201ENST00000637524 83 ntBASIC1.15□□□□□ -2.23
COL5A3P25940 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
COL5A3P25940 MIR330-201ENST00000362196 94 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 Y_RNA.258-201ENST00000364613 105 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 RNA5SP125-201ENST00000364843 120 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 RNU4-66P-201ENST00000365199 138 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 RNU6-282P-201ENST00000365357 103 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 RNU4-48P-201ENST00000365559 182 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 Y_RNA.381-201ENST00000365666 102 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 RNU6-517P-201ENST00000384362 110 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 MIR301A-201ENST00000385261 86 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 MIR454-201ENST00000390180 115 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 AL590002.1-201ENST00000406554 418 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 FTH1P15-201ENST00000406984 280 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 RNU2-49P-201ENST00000410666 184 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 VN1R36P-201ENST00000414936 291 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 MTATP6P18-201ENST00000417994 673 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 PTGES3P4-201ENST00000426243 356 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 MED13P1-201ENST00000428342 171 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 AC016691.1-201ENST00000441321 413 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 RPL23AP3-201ENST00000453844 468 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.14□□□□□ -2.23
COL5A3P25940 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.14□□□□□ -2.23
COL5A3P25940 AC009646.1-201ENST00000510455 318 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 HSPE1P4-201ENST00000550617 308 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.14□□□□□ -2.23
COL5A3P25940 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.14□□□□□ -2.23
COL5A3P25940 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.14□□□□□ -2.23
COL5A3P25940 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.14□□□□□ -2.23
COL5A3P25940 AC012507.3-201ENST00000603556 477 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 AC087045.1-201ENST00000605856 382 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 AL121992.2-201ENST00000606262 256 ntBASIC1.14□□□□□ -2.23
COL5A3P25940 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.14□□□□□ -2.23
COL5A3P25940 RNU6-179P-201ENST00000363350 107 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 SNORA16B-201ENST00000364674 135 ntBASIC1.13□□□□□ -2.23
COL5A3P25940 RNU6-748P-201ENST00000384648 107 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms