Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX1P22670 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX1P22670 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFX1P22670 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
RFX1P22670 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.4□□□□□ -1.71
RFX1P22670 AC069528.2-201ENST00000624849 1991 ntBASIC4.4□□□□□ -1.71
RFX1P22670 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RFX1P22670 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RFX1P22670 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFX1P22670 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RFX1P22670 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.39□□□□□ -1.71
RFX1P22670 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.39□□□□□ -1.71
RFX1P22670 RNU6-727P-201ENST00000363592 107 ntBASIC4.39□□□□□ -1.71
RFX1P22670 SNORD6-201ENST00000365444 73 ntBASIC4.39□□□□□ -1.71
RFX1P22670 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.39□□□□□ -1.71
RFX1P22670 HMGN2P31-201ENST00000432430 273 ntBASIC4.39□□□□□ -1.71
RFX1P22670 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX1P22670 Y_RNA.638-201ENST00000459374 113 ntBASIC4.39□□□□□ -1.71
RFX1P22670 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.39□□□□□ -1.71
RFX1P22670 RPL31P61-201ENST00000496160 376 ntBASIC4.39□□□□□ -1.71
RFX1P22670 RNU6-966P-201ENST00000516479 104 ntBASIC4.39□□□□□ -1.71
RFX1P22670 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.39□□□□□ -1.71
RFX1P22670 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC4.39□□□□□ -1.71
RFX1P22670 TGIF1P1-201ENST00000558095 802 ntBASIC4.39□□□□□ -1.71
RFX1P22670 MIR6500-201ENST00000622700 86 ntBASIC4.39□□□□□ -1.71
RFX1P22670 AC018692.3-201ENST00000623929 123 ntBASIC4.39□□□□□ -1.71
RFX1P22670 MIR3674-201ENST00000636576 68 ntBASIC4.39□□□□□ -1.71
RFX1P22670 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
RFX1P22670 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RFX1P22670 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.39□□□□□ -1.71
RFX1P22670 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX1P22670 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFX1P22670 RNA5SP502-201ENST00000362694 119 ntBASIC4.38□□□□□ -1.71
RFX1P22670 RNU6-1289P-201ENST00000384431 106 ntBASIC4.38□□□□□ -1.71
RFX1P22670 RNA5SP475-201ENST00000410568 110 ntBASIC4.38□□□□□ -1.71
RFX1P22670 RNU6-1199P-201ENST00000411249 104 ntBASIC4.38□□□□□ -1.71
RFX1P22670 AC097463.2-201ENST00000421074 142 ntBASIC4.38□□□□□ -1.71
RFX1P22670 PRSS3P4-201ENST00000453323 162 ntBASIC4.38□□□□□ -1.71
RFX1P22670 AC145146.1-201ENST00000496370 254 ntBASIC4.38□□□□□ -1.71
RFX1P22670 AL512605.2-201ENST00000592972 256 ntBASIC4.38□□□□□ -1.71
RFX1P22670 RNU1-30P-201ENST00000606575 163 ntBASIC4.38□□□□□ -1.71
RFX1P22670 AC091932.3-201ENST00000624223 323 ntBASIC4.38□□□□□ -1.71
RFX1P22670 AL359854.1-201ENST00000614203 1594 ntBASIC4.38□□□□□ -1.71
RFX1P22670 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX1P22670 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX1P22670 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX1P22670 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.38□□□□□ -1.71
RFX1P22670 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.38□□□□□ -1.71
RFX1P22670 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX1P22670 SNORD35B-201ENST00000363660 87 ntBASIC4.37□□□□□ -1.71
RFX1P22670 RNU6-1264P-201ENST00000383891 107 ntBASIC4.37□□□□□ -1.71
RFX1P22670 MIR3074-201ENST00000384885 81 ntBASIC4.37□□□□□ -1.71
RFX1P22670 RNA5SP354-201ENST00000391247 136 ntBASIC4.37□□□□□ -1.71
RFX1P22670 RNU2-54P-201ENST00000410299 190 ntBASIC4.37□□□□□ -1.71
RFX1P22670 RNA5SP39-201ENST00000411245 120 ntBASIC4.37□□□□□ -1.71
RFX1P22670 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX1P22670 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX1P22670 AC009237.7-201ENST00000447357 229 ntBASIC4.37□□□□□ -1.71
RFX1P22670 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.37□□□□□ -1.71
RFX1P22670 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX1P22670 SNORD59.2-201ENST00000516873 68 ntBASIC4.37□□□□□ -1.71
RFX1P22670 RNU6-711P-201ENST00000517255 106 ntBASIC4.37□□□□□ -1.71
RFX1P22670 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX1P22670 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX1P22670 AC025627.2-201ENST00000576220 160 ntBASIC4.37□□□□□ -1.71
RFX1P22670 SNORD11B-201ENST00000607707 90 ntBASIC4.37□□□□□ -1.71
RFX1P22670 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX1P22670 AC019176.2-201ENST00000611579 315 ntBASIC4.37□□□□□ -1.71
RFX1P22670 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX1P22670 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.37□□□□□ -1.71
RFX1P22670 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX1P22670 AC092593.1-201ENST00000515413 1815 ntBASIC4.37□□□□□ -1.71
RFX1P22670 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX1P22670 AC016588.2-201ENST00000632484 3021 ntBASIC4.36□□□□□ -1.71
RFX1P22670 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.36□□□□□ -1.71
RFX1P22670 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RFX1P22670 LINC02471-203ENST00000641941 4752 ntBASIC4.36□□□□□ -1.71
RFX1P22670 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.36□□□□□ -1.71
RFX1P22670 Y_RNA.464-201ENST00000384282 110 ntBASIC4.36□□□□□ -1.71
RFX1P22670 RPS27P26-201ENST00000494583 239 ntBASIC4.36□□□□□ -1.71
RFX1P22670 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.36□□□□□ -1.71
RFX1P22670 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.36□□□□□ -1.71
RFX1P22670 AP002001.1-203ENST00000534002 267 ntBASIC4.36□□□□□ -1.71
RFX1P22670 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.36□□□□□ -1.71
RFX1P22670 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.36□□□□□ -1.71
RFX1P22670 AC039056.2-201ENST00000622261 511 ntBASIC4.36□□□□□ -1.71
RFX1P22670 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.36□□□□□ -1.71
RFX1P22670 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RFX1P22670 IPO8P1-201ENST00000455509 3109 ntBASIC4.36□□□□□ -1.71
RFX1P22670 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX1P22670 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX1P22670 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.36□□□□□ -1.71
RFX1P22670 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
RFX1P22670 ZNF962P-201ENST00000443465 3140 ntBASIC4.35□□□□□ -1.71
RFX1P22670 MAPK10-253ENST00000641010 4072 ntBASIC4.35□□□□□ -1.71
RFX1P22670 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.35□□□□□ -1.71
RFX1P22670 RNU1-75P-201ENST00000347264 129 ntBASIC4.35□□□□□ -1.71
RFX1P22670 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RFX1P22670 EIF4EP4-201ENST00000424916 578 ntBASIC4.35□□□□□ -1.71
RFX1P22670 AC004386.2-201ENST00000441858 148 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms