Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNU6-873P-201ENST00000363833 107 ntBASIC4.07□□□□□ -1.76
ERCC3P19447 SNORA48.2-201ENST00000390926 124 ntBASIC4.07□□□□□ -1.76
ERCC3P19447 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.07□□□□□ -1.76
ERCC3P19447 RPS29P2-201ENST00000479278 136 ntBASIC4.07□□□□□ -1.76
ERCC3P19447 SEM1P1-201ENST00000506694 209 ntBASIC4.07□□□□□ -1.76
ERCC3P19447 RN7SKP83-201ENST00000516512 178 ntBASIC4.07□□□□□ -1.76
ERCC3P19447 RNU6-897P-201ENST00000517135 105 ntBASIC4.07□□□□□ -1.76
ERCC3P19447 MIR4503-201ENST00000582187 83 ntBASIC4.07□□□□□ -1.76
ERCC3P19447 MIR3199-1-201ENST00000582434 88 ntBASIC4.07□□□□□ -1.76
ERCC3P19447 AL121655.1-201ENST00000605811 308 ntBASIC4.07□□□□□ -1.76
ERCC3P19447 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.07□□□□□ -1.76
ERCC3P19447 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.07□□□□□ -1.76
ERCC3P19447 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ERCC3P19447 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ERCC3P19447 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ERCC3P19447 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC3P19447 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ERCC3P19447 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ERCC3P19447 RNU4-15P-201ENST00000362613 141 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 Y_RNA.439-201ENST00000384119 94 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 RNU6-1001P-201ENST00000411265 100 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.06□□□□□ -1.76
ERCC3P19447 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC3P19447 RPEP5-201ENST00000441137 268 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 AC096638.1-201ENST00000444678 216 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.06□□□□□ -1.76
ERCC3P19447 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.06□□□□□ -1.76
ERCC3P19447 AC103975.1-201ENST00000482506 483 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 RPL23AP70-201ENST00000483361 460 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 SCARNA11.3-201ENST00000517276 130 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC3P19447 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.06□□□□□ -1.76
ERCC3P19447 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC4.06□□□□□ -1.76
ERCC3P19447 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.06□□□□□ -1.76
ERCC3P19447 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.06□□□□□ -1.76
ERCC3P19447 AL161670.1-201ENST00000554348 137 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 MIR4659A-201ENST00000580269 81 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 YPEL5P2-201ENST00000605553 359 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 Y_RNA.772-201ENST00000606692 102 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 AC018692.3-201ENST00000623929 123 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.06□□□□□ -1.76
ERCC3P19447 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.06□□□□□ -1.76
ERCC3P19447 AC099654.7-201ENST00000635788 2127 ntBASIC4.06□□□□□ -1.76
ERCC3P19447 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
ERCC3P19447 AC069528.2-201ENST00000624849 1991 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.05□□□□□ -1.76
ERCC3P19447 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.05□□□□□ -1.76
ERCC3P19447 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC3P19447 Y_RNA.19-201ENST00000362462 99 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 U3.9-201ENST00000363823 204 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 Y_RNA.458-201ENST00000384240 102 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 SNORD12B-201ENST00000410433 91 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 SDAD1P3-201ENST00000427380 333 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 RPS3P1-201ENST00000456781 192 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.05□□□□□ -1.76
ERCC3P19447 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.05□□□□□ -1.76
ERCC3P19447 AC027176.1-201ENST00000560204 514 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 AC023824.2-201ENST00000566185 400 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 MIR3149-201ENST00000584629 83 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 AP003355.3-201ENST00000623465 114 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.05□□□□□ -1.76
ERCC3P19447 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC3P19447 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
ERCC3P19447 AP003122.5-201ENST00000527668 3766 ntBASIC4.05□□□□□ -1.76
ERCC3P19447 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ERCC3P19447 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERCC3P19447 AC026241.1-201ENST00000517873 2142 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ERCC3P19447 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ERCC3P19447 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.04□□□□□ -1.76
ERCC3P19447 RNU6-137P-201ENST00000363680 108 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 SNORA38.1-201ENST00000364172 131 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 MIR128-1-201ENST00000384921 82 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 RPS26P42-201ENST00000413485 326 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 ELOCP20-201ENST00000422460 345 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.04□□□□□ -1.76
ERCC3P19447 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.04□□□□□ -1.76
ERCC3P19447 AC027124.2-201ENST00000428249 105 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 AC010095.1-201ENST00000443543 144 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 AC073910.1-201ENST00000445047 438 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.04□□□□□ -1.76
ERCC3P19447 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.04□□□□□ -1.76
ERCC3P19447 AC125232.2-201ENST00000592457 143 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 SNRPGP20-201ENST00000604477 205 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 AC004832.5-201ENST00000608677 401 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 AC010999.1-201ENST00000611856 324 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 PCGEM1.1-201ENST00000613431 131 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 MIR7112-201ENST00000616126 65 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 MIR8057-201ENST00000620957 69 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 AC130454.1-201ENST00000622948 401 ntBASIC4.04□□□□□ -1.76
ERCC3P19447 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ERCC3P19447 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.03□□□□□ -1.76
ERCC3P19447 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
ERCC3P19447 Y_RNA.64-201ENST00000362845 102 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 RNU5F-3P-201ENST00000363767 117 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 RNU6-770P-201ENST00000363929 105 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 RNU6-281P-201ENST00000384212 103 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 SNORA12-201ENST00000391162 147 ntBASIC4.03□□□□□ -1.76
ERCC3P19447 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms